Thermococcus aggregans: NF865_00040
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Entry
NF865_00040 CDS
T10933
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tagg Thermococcus aggregans
Pathway
tagg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tagg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NF865_00040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tagg03019
]
NF865_00040
03009 Ribosome biogenesis [BR:
tagg03009
]
NF865_00040
04131 Membrane trafficking [BR:
tagg04131
]
NF865_00040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tagg04147
]
NF865_00040
Messenger RNA biogenesis [BR:
tagg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NF865_00040
Ribosome biogenesis [BR:
tagg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NF865_00040
Membrane trafficking [BR:
tagg04131
]
SNARE
SNARE associated proteins
Others
NF865_00040
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NF865_00040
Exosome [BR:
tagg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NF865_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_22
AAA_14
AAA_5
TIP49
AAA_33
Vps4_C
nSTAND3
RNA_helicase
AAA_28
AAA_24
IstB_IS21
Sigma54_activat
Mg_chelatase
AAA_18
DUF815
NPHP3_N
AAA_25
AAA_7
ABC_tran
Parvo_NS1
Bac_DnaA
AAA_17
TsaE
ATPase_2
SLFN-g3_helicase
PhoH
NB-ARC
AAA_3
ATPase
AAA_lid_PRS2_C
Zeta_toxin
DUF5906
TetR_C_6
Zot
PBC
DUF445
DUF3606
Motif
Other DBs
NCBI-ProteinID:
USS40671
UniProt:
A0A9E7MXP1
LinkDB
All DBs
Position
7406..9838
Genome browser
AA seq
810 aa
AA seq
DB search
MADRREIKLKVASAYQRDVGRGIVRIDRNAMRKIGVQPGDIVEIIGTKNTAAIVWPAYPE
DEGLDIIRMDGTIRKNAGVGLGDEVTVRKADVKEAQRVVLAPTEPIRFGQDFVDWLHSRL
VGRPVVRGDYIRIGVLGQELTFVVTATTPSGVVQITEFTEFTISEKPVKEVAKTPALGVT
YEDIGGLKDVIQKIREMIELPLKHPEIFEKLGIEPPKGVLLYGPPGTGKTLLAKAVANEA
NAHFIAINGPEIMSKYYGESEERLREVFKEAEENAPSIIFIDEIDAIAPKREEVSGEVEK
RVVAQLLTLMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDREIEVGVPDKQGRKEILQ
IHTRGMPIEPDFRKGEVKKVLEELKQDDRFKEVAEKALKRIDAVADRDEEIKRLLREIDE
RLYEEVRHRLIDLLLEELAEKTHGFVGADLAALAREAAMAALRRLIEEGKIDFEAETIPK
EVLEELKVTRRDFYEALKMVEPSALREVLIEVPNVRWEDIGGLEEVKQELREAVEWPLKY
PEAFMAMGITPPKGILLYGPPGTGKTLLAKAVATESEANFIGIRGPEVLSKWVGESEKNI
REIFRKARQAAPTVIFIDEIDAIAPRRGTDVNRVTDRLINQLLTEMDGIEENSGVVVIAA
TNRPDILDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRNVPLAEDVSLEELAKRTEGY
TGADIEAVVREAALNAMRRAIAEGIIKPGMRASEIRQEVKVTMKDFEEALKKVGPSVSKE
TMEYYKRIEEMFKKGRAELTKEQNKDRSVF
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaggagagaaattaaacttaaagttgcttccgcttaccagagggatgttggt
aggggaattgttaggattgataggaatgcaatgaggaaaatcggagtccagccaggagat
attgtggaaattattggtactaaaaacactgctgcaatagtttggcccgcttacccagag
gatgaagggcttgacataataagaatggatggtacaataagaaaaaacgctggcgttggt
cttggagatgaagtaaccgtaaggaaagctgacgttaaagaagctcagagagtcgttttg
gctcccacagagcctattagatttggccaagactttgttgattggctccattcaaggtta
gttggaagacctgtggttagaggagactacattagaatcggtgtccttggacaggagcta
acatttgttgtcacggcaacaacgccttcgggagtagttcaaataacggaattcactgaa
ttcacgatctcagagaagccagtaaaagaagtcgcaaagacaccagctctgggagtcacc
tatgaggacattggtggtctcaaagatgttatccaaaagatcagagagatgatagagctt
ccgctcaaacacccagagatcttcgagaagctcggtattgagccacccaagggtgttctg
ctttatggaccaccgggaactggtaagacactcctcgctaaagctgttgccaatgaggca
aacgctcacttcatagcaataaacggtccagagataatgagcaagtactacggtgagagc
gaagagagactcagagaagtcttcaaagaagcagaagaaaacgctccgagcataatcttt
attgatgaaattgatgcaatagcaccaaaaagagaggaagtttctggagaagtcgagaag
agagttgttgcccagctgcttacattgatggacggtttgaagagcagaggaaaagttata
gttattggggcaactaacaggcctgatgcaattgatccagctttgagaagacccggcaga
ttcgacagagaaattgaagtcggcgttccagacaagcagggaaggaaggaaatactccaa
atccacacaagaggaatgccaattgaacctgacttcaggaagggagaagttaagaaagtg
cttgaagagcttaagcaggacgataggttcaaagaagttgccgaaaaagcccttaagaga
atagacgcagtagccgacagagacgaggagattaagagactccttagggagatcgatgag
agactctacgaagaagtaagacaccgtttgattgaccttctccttgaggagcttgcggaa
aagactcacggattcgttggagctgatttggcagcattggcaagagaagccgctatggca
gcattgagaaggcttatcgaggagggcaagatagactttgaggcagagactattccaaag
gaagtcctcgaagagctcaaagtaaccagaagggacttctatgaggctttgaagatggtg
gaaccttcggctcttagggaggtcctcatagaggttccgaacgttaggtgggaggacatt
ggaggtcttgaggaagtcaagcaagaactaagagaagccgtagaatggccactgaagtac
ccagaagcattcatggccatgggaatcacaccgcccaagggtatcctcctctatggacca
cctggaaccggtaagactctcttagcaaaggcagtagcaacggagagcgaggctaacttc
attggcatccgcggaccggaagtccttagcaagtgggtcggagagagcgagaagaacatt
cgtgagatattcagaaaggcaagacaagctgctcctacggttatcttcattgacgaaata
gacgcaatagctccaagaaggggtacagatgttaacagagttacagataggctcattaac
cagttactgactgagatggatggtattgaggagaacagcggtgtggtagttattgccgcc
acgaacaggcctgacatactcgacccagcattgcttagacccggcaggttcgacaggctt
atcttggttccagcgccagacgaaaaggcaagattagaaatcttcaaagtccacacaagg
aatgttccgctggctgaagacgtcagcctagaagaactcgcaaagagaaccgagggctac
actggagctgacattgaggcagtagtaagagaagctgcactcaatgcaatgagaagggca
atagccgagggaataattaagccgggaatgagggcaagtgagatcaggcaggaagtcaag
gttacaatgaaggactttgaagaagcactcaagaaggtcggtccaagcgttagcaaggaa
acaatggagtactacaagagaatagaagagatgttcaagaagggcagagctgagctaacc
aaagaacagaacaaagacagaagtgtcttctga
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