KEGG   Thermococcus aggregans: NF865_00680
Entry
NF865_00680       CDS       T10933                                 
Name
(GenBank) 50S ribosomal protein L40e
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
tagg  Thermococcus aggregans
Pathway
tagg03010  Ribosome
Brite
KEGG Orthology (KO) [BR:tagg00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    NF865_00680
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    NF865_00680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:tagg03011]
    NF865_00680
   04121 Ubiquitin system [BR:tagg04121]
    NF865_00680
Ribosome [BR:tagg03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    NF865_00680
  Archaea
    NF865_00680
Ubiquitin system [BR:tagg04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   NF865_00680
SSDB
Motif
Pfam: Ribosomal_L40e Zn_Ribbon_1 Zn_ribbon_RPAB4 DZR DZR_2 Toxin_5 Zn_ribbon_10 HVO_0416 Zn_ribbon_3 Zn_ribbon_GTF2H2
Other DBs
NCBI-ProteinID: USS41756
UniProt: A0A9E7SQF7
LinkDB
Position
complement(114198..114356)
AA seq 52 aa
MARFPEAEARIFRKYICMRCGATNPWKAEKCRKCGYKGLRPKAKEPRGGAGR
NT seq 159 nt   +upstreamnt  +downstreamnt
atggcgaggttccctgaagcagaggcaagaatatttaggaagtatatatgtatgaggtgc
ggtgctaccaacccatggaaagcagagaagtgcagaaagtgcggatacaagggattgagg
ccaaaagctaaggagccaagaggaggagcaggacgttag

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