Thermococcus aggregans: NF865_04785
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Entry
NF865_04785 CDS
T10933
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tagg Thermococcus aggregans
Pathway
tagg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tagg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NF865_04785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tagg03021
]
NF865_04785
Transcription machinery [BR:
tagg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NF865_04785
Prokaryotic type
Archaeal type
TFB
NF865_04785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cas12f1-like_TNB
Sigma70_r4
Zn_ribbon_tTFIIB
Ribosomal_S27e
Cyclin_N
Zn_ribbon_LysW
HTH_Tnp_ISL3
Lar_restr_allev
A2L_zn_ribbon
Zn_ribbon_IS1595
HTH_24
BRF2-like_C_cyclin_rpt
Zn_Ribbon_YjdM
DUF7351
zf-Mss51
UMPH-1
RPA_interact_C
Zn_ribbon_PADR1
Trm112p
Motif
Other DBs
NCBI-ProteinID:
USS41490
UniProt:
A0A9E7MZ53
LinkDB
All DBs
Position
complement(833139..834059)
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AA seq
306 aa
AA seq
DB search
MTQFGGIKRCPVCGSESLIYDPSRAEIVCSECGYVLDEDIMDLGPEWRAFEPGQREKRSR
VGAPETVMLHDKGLSTDIDWRNKDIHGSDISGGVRAKIYRLRMWQRRMRISDAIDRNLAF
ALSELDRMGSQLGLPRNIREIGAVLYRKAVINKLVRGRSIEGMVSACLYAACRIANAPRT
LDEIEDVSKVDKKEIGRSYRYLARELNLRLRPTSPIDYVMRFGDQLGINEKTKRRAVKIL
KQAIEKGLTSGKGPTGIAAAAIYIASLLEGEKMTQREVAEVARVTEVTVRNRYKELVEKL
NIRIPT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttgactcaatttgggggtattaaaagatgccctgtttgtggctcggagagcttgatctat
gatccaagcagggccgagattgtttgttccgagtgcggatatgttttggacgaagacatt
atggatttgggaccagaatggagggcatttgagcccggacaaagggagaagcgctccaga
gtgggggcaccggaaactgtaatgctccatgataaggggctttctacagatatagattgg
agaaataaagacattcatggaagcgatatctctgggggtgttagagcaaagatataccgt
cttagaatgtggcagaggagaatgaggataagcgatgccatagatagaaatcttgcattc
gccttgagcgaacttgataggatgggttctcagctggggcttcctaggaatataagggaa
atcggggcagttttgtacagaaaggctgtcatcaataagctagttagaggacgatccata
gagggaatggtctctgcatgtctttatgcagcgtgtaggattgcaaatgcgcccagaaca
ttagatgagatagaagatgtttcaaaagttgataaaaaggagattggacggagttacaga
tatctggctagggaactcaatcttcggctacggccaaccagccccattgactacgttatg
cgctttggcgatcagcttggaataaatgaaaagacaaaaagaagggccgtaaagatatta
aagcaggcaattgaaaaagggcttacaagcggaaaaggaccgactggaatagctgcggct
gctatttatatagcgagccttcttgaaggagaaaagatgacccaaagggaagtagcagaa
gttgcgagagtgactgaagttacagtgaggaacagatataaagaacttgtagaaaaactt
aatatacgcatccccacttaa
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