Thermococcus aggregans: NF865_07115
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Entry
NF865_07115 CDS
T10933
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tagg Thermococcus aggregans
Brite
KEGG Orthology (KO) [BR:
tagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tagg03032
]
NF865_07115 (topA)
03400 DNA repair and recombination proteins [BR:
tagg03400
]
NF865_07115 (topA)
Enzymes [BR:
tagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NF865_07115 (topA)
DNA replication proteins [BR:
tagg03032
]
Prokaryotic type
DNA Topoisomerases
NF865_07115 (topA)
DNA repair and recombination proteins [BR:
tagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NF865_07115 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Lar_restr_allev
RASSF8-10_RA
DUF4364
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
USS40103
UniProt:
A0A9E7SMW1
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All DBs
Position
1302814..1304997
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AA seq
727 aa
AA seq
DB search
MTTLIIAEKPNVARKIAYALAEGKPIRKTIGKVPYYELTRDGKKIIVAPAVGHLFSLAPK
EKTYGYPVFDIEWVPVYVAEKGKSYAKEYIKALRELAKRADEFVVACDYDTEGEVIGYTA
LKYACGVDPAKAKRMKFSALTKKDLLRAWYNLEPTINFGMADAGIARHVLDWYWGVNLSR
ALSSAVRKASGKWIILSTGRVQGPTLKFLVEREKEIENFVPTPYWVIKMVLEKNNQQYTA
TYEKDRILDEEEAKRIVQEAKKGPAFVEKVEVKQQQRNPPHPFDLGTLQREAYSAFGYSP
KKTLDIAQRLYEMSLCSYPRTSSQKLPKNLNFRSIIQNLAKISDYKPFAHELLGKGELKP
VEGKKEDPAHPAIYPTGELPKPGELSKEEQNLYDLIVRRFLALFADPAIRESVKVIINSN
NHRFILSGSRTIKEGWLKIYGKYVSFDEVLLPKFKEEEPIKVIQIKREKKKTKPPTRYSP
ASIIKKMEDLGIGTKATRAQILETLYSRGYIEGKKKIKVTPLGMKVVEALENSVPDIISV
ELTREFEEKMEQIMQKKISKEKVIEESKETLLKILKEFKQKEGEIGKKLLEAFIESQGNK
NSKKKKKESKESKVAKELTAEEEESIKKSLEEKKSADTIIVGKCPKCGSDLVVKYNRKTG
KRFVGCSNWPNCDVTYPLLQRGEIIPTGKTCPECGNAPIVKIKERNREYEICLDMNCYKN
RKRRKSY
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgactacgctcataattgcagagaagcccaacgtagccaggaaaatagcctatgctctc
gcagagggcaaaccaataaggaaaactattggtaaagttccatactatgagctaacaaga
gatgggaagaaaataatagtggctccagctgttgggcatctattctccctcgcacccaaa
gaaaaaacctatggctacccggtttttgatatagagtgggttcccgtttatgttgccgaa
aaaggaaaaagctacgcaaaggagtatataaaagccctgagagagcttgcaaagagagca
gatgagtttgtcgttgcatgtgactacgacaccgaaggagaggttataggatatacagcc
ttaaagtatgcttgtggagttgaccctgcaaaagctaagagaatgaagttctccgccctt
acaaaaaaagacctgctaagagcttggtacaacttagagccgactattaactttgggatg
gcggatgctgggatagcgcgccatgttttggactggtactggggagtcaacctttcgagg
gcattgagctcggccgtgagaaaggccagcggtaagtggataattctttccaccggtaga
gttcaagggccaaccttgaagttcctggttgagagagagaaggaaatagagaacttcgtt
cccacgccctactgggtcataaaaatggttctcgaaaagaacaaccagcagtacactgca
acctacgagaaggacagaatattagacgaggaagaggccaagagaatcgtccaggaagct
aagaaaggacctgccttcgtcgagaaagttgaggtaaaacagcagcagagaaatcctcct
cacccctttgaccttggaacgcttcaaagggaagcatactccgcttttggctacagccca
aagaagactttagacatagcacagagactttatgagatgtctttgtgctcttacccgaga
acctcgtctcaaaagctccccaagaacctaaacttccgctctataattcaaaacctcgcc
aagatttcggattacaaaccctttgcacacgagcttttggggaaaggggaactcaaacct
gtagagggaaaaaaggaagaccctgcgcatccagctatatatccaactggagagctacct
aaacccggagagctaagcaaagaagagcagaacctttatgacctgatagttagaaggttt
ttagccctttttgcggatcctgcaatcagagagagcgtaaaggttatcataaactcaaac
aaccaccgctttattctcagcggttcaagaacaattaaagagggctggttgaagatttat
gggaaatacgttagttttgatgaagttctgcttccaaaatttaaagaagaagagccgata
aaagttattcaaattaagcgggagaaaaagaaaaccaaacctcccacaagatattctccg
gcaagcattatcaaaaaaatggaagacctcggtattggaaccaaggctacgagagctcag
attttggagaccctatactcgaggggctacatagagggcaagaagaagataaaggtgact
cccctcggtatgaaggtagtagaagcgctggaaaacagcgttcctgacataataagcgtt
gaactgacaagagagtttgaagaaaaaatggagcagataatgcagaaaaagataagcaag
gaaaaagtcattgaggagtccaaagaaaccctgttaaaaatcttaaaagagttcaaacag
aaagagggcgaaattgggaagaagctcctcgaagcatttattgagagccaaggaaataaa
aacagcaaaaagaaaaagaaagagagtaaagagagtaaggttgcaaaagagctaactgcg
gaggaagaagagagcatcaaaaagtcgcttgaagagaaaaagtccgcagatactataata
gttggaaagtgccctaaatgcggtagtgaccttgtggtgaagtacaacagaaagacaggc
aaaaggtttgtgggctgctctaattggccgaattgtgacgttacctatccacttctccaa
cggggtgaaataatcccaacgggtaaaacgtgccctgaatgtggaaatgccccaatagtg
aaaatcaaagagcgcaacagagaatacgagatatgcctcgatatgaactgctacaagaac
cgaaagagaagaaaaagctattag
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