Thermococcus aggregans: NF865_08400
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Entry
NF865_08400 CDS
T10933
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tagg Thermococcus aggregans
Pathway
tagg03022
Basal transcription factors
tagg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tagg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NF865_08400
09124 Replication and repair
03420 Nucleotide excision repair
NF865_08400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tagg03021
]
NF865_08400
03036 Chromosome and associated proteins [BR:
tagg03036
]
NF865_08400
03400 DNA repair and recombination proteins [BR:
tagg03400
]
NF865_08400
Enzymes [BR:
tagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NF865_08400
Transcription machinery [BR:
tagg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NF865_08400
Chromosome and associated proteins [BR:
tagg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
NF865_08400
DNA repair and recombination proteins [BR:
tagg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NF865_08400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
DEAD
ResIII
AAA_30
AAA_19
Motif
Other DBs
NCBI-ProteinID:
USS40332
UniProt:
A0A9E7SP05
LinkDB
All DBs
Position
complement(1537831..1539762)
Genome browser
AA seq
643 aa
AA seq
DB search
MSEYFPYHSLRPNQEEFIKLVDNAVRNGENLVIEAPTGFGKTISVLAGALPYAKEMGYKI
IYLARTHKQMDRVIEELKAINKKVHVSGVEFRSRKELCLHQYIQNFAPDAYNAMIVCKNL
KKLGKCEFFENLKKKKEEFDELVQYFLQTPAEPISILTYSKMFDFCPYELTRKVALESDV
IVASYLYMISPSIRENFMSYFDFEYSDLILIFDEAHNLPDQAINALSDKISIHSINRAIK
EADEYKEHEIANFLSIFLKGLENLYQEKLKDMQIEEVPILPESIFYHVFDVLGINERGLV
RILDQMVKAGDAIREDKIERNLPPRSYVGRVGEFLLLWFALIGKEDYLFLLSRDKGLSLE
LVALDPSKALSFVKHVQSTIFMSGTLTPLEAFVDIMGIEGKLKKFPRMVKRENALVLVAK
DVSTRGDERSLGLYRKLTKYIVEAAKLIPKNVGVFTASYEVLEGLLSANVDIQIEEETGK
KVFIEKKGASSKENDLLVMAFKEEAKKDGAVLLGVMGGRNSEGQDYSGDEMNGVVLVGIP
YARPTPRVQAQIRYFENKFPGKGRYYGYVLPAHRKLVQAAGRVHRSAEDKGAIIVLDYRL
LWSNVRKDLPDWMRETIKPVTLASMKRCLIDFYREEKIKVKEN
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatatttcccatatcattccctaaggccaaatcaagaggagttcatcaagcta
gtggataatgcagtaaggaatggcgaaaacttagttattgaagccccaacaggttttgga
aaaactataagcgtattagctggagccttgccctatgccaaagagatgggttataagata
atctaccttgcgagaacgcacaagcagatggacagagtcatagaagagctcaaagccata
aacaaaaaggttcatgtaagtggagttgaatttaggagcagaaaagaactttgtcttcat
cagtatatccagaactttgcccccgatgcctacaacgcaatgatagtgtgtaaaaacctc
aaaaagcttggcaaatgtgagttttttgagaaccttaagaaaaagaaagaggaattcgac
gagctcgttcaatactttctccagacacctgcagagcccatatcgatacttacgtattcc
aaaatgttcgacttctgcccttatgagcttacccggaaggtcgccctcgagtcagatgta
atagtggccagctatctgtacatgataagcccgtctataagggagaattttatgagctat
tttgatttcgagtactctgacttgatacttatctttgatgaagctcacaacctaccagat
caggcaataaacgccctgagcgacaagataagcatccacagcatcaacagggcaataaaa
gaagccgatgagtataaggaacacgaaatcgccaatttcttaagcatctttctaaagggc
ttggagaatctctatcaggagaaattgaaggacatgcagattgaagaagtgcccatactg
ccggagagcatcttttatcatgttttcgacgttttgggaatcaatgagagaggactcgtc
agaattcttgaccagatggttaaggccggagatgccataagagaggacaaaatcgagaga
aatctacccccaaggagctatgttggtagggtgggagagtttttactcctctggtttgcc
cttatcggaaaagaagactatctctttcttctaagcagggataaagggctgtctcttgaa
cttgtagcgctggatccctcaaaagcgctcagtttcgttaaacatgtccaatcgacaatt
ttcatgtcaggaacgctgactcctctagaggcttttgtggacataatggggatagagggc
aagcttaagaagtttcccagaatggttaagagggaaaatgcccttgttctagtggctaaa
gatgtttcaaccagaggagatgagagaagccttgggctgtacagaaaactcacaaagtat
atcgttgaggctgcgaagcttattccaaagaatgtaggcgttttcacggcttcttatgaa
gttcttgaggggcttttatctgccaacgtggacatacaaatagaagaggaaaccggaaaa
aaggtattcattgaaaagaaaggggcttcttcaaaagagaacgatcttttggtgatggca
tttaaagaagaggcaaagaaagatggagctgttttgcttggggttatggggggaagaaac
agcgaagggcaggactattctggagatgaaatgaacggcgttgttttagtcggcattccc
tatgcgaggccgacgccaagggtacaggctcaaataaggtactttgaaaacaagttcccc
gggaagggaaggtactatggatacgtattaccggctcatagaaagctggttcaagctgct
ggtagggtgcatagaagtgcagaagataagggagcaataatagtcttagattaccgctta
ttgtggagcaatgttagaaaagacctgccagattggatgagggaaacaataaaacccgtg
actttggcttcaatgaagcggtgccttatagacttctatagggaagaaaaaattaaggtg
aaggagaattag
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