Thermococcus aggregans: NF865_08545
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Entry
NF865_08545 CDS
T10933
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
tagg Thermococcus aggregans
Brite
KEGG Orthology (KO) [BR:
tagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tagg03019
]
NF865_08545
Messenger RNA biogenesis [BR:
tagg03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
NF865_08545
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
SNF2-rel_dom
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
USS40356
UniProt:
A0A9E7MX30
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All DBs
Position
1563631..1566138
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AA seq
835 aa
AA seq
DB search
MLFVIRKGRKDNELEAFYIENEPEKLSQIQNLKAERIFRLIMRDKRLFKVLEGSKYQNPK
EIEKMLKTARIVLTSDAEEWKEYFKIRLQNKKVEKAGLCRLCLLNGKITVLTEGNRIRYH
HEFICESCAEEELKNELRYRFRSLGMFDQAKKLLERFRDLDKVMAIFDPRFDPTKNPDVT
KWDELEPKHIKGEELSIDEINIPEEFKRVLKEEGVSKLLPVQSLAIKNGLLEGENLLVVS
ATASGKTLIGELAGVPKAIEGKKFLFLVPLVALANQKYEDFKRRYSKLGLKVAIRVGMSR
IKTKDELVVVDTGIDADIIVGTYEGIDYLLRAGRKIGDVGTIVVDEIHMLDDEERGARLD
GLIARLRKLYPNAQFIGLSATIGNPQELAKELGLKLVLYDERPVALERHVIIARNESEKW
RYVAQLCKAETMRKSPQGFKGQSIVFTFSRKRCHELAAFLTSKGLKAKPYHSGLPYHQRK
LTEMEFQAQMLDVVVTTAALGAGVDFPASQVIFESLAMGNKWLSVREFHQMLGRAGRPLY
HEKGKVYLIVEPGRKYSAQMEGTEDEIAFKLLTAPIEPVCVEWSDEMEQDQVLAHSCIFS
YLDDVEEVQNKCLGANQSAEKVLEKLEEFEFVKLRGKLVNVTPYGRAVSMSFLLPKEAQF
IRKNLFKKHPREIAIKLQPFENVYLSGVVQRELEKAVRGRLSSNIFSPSFASILEELEKV
LPEVSPNVQDKLFLIYQDFFMCEEEECTEYAMERVSLLIIELRRQGKHPTQIAEYFRRQY
SLVVYPGDVFTWLDGIIRKLEAIERIAKVFRAKKAEFEARTLRRELEEGRKLRRD
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgctctttgttatcagaaagggaaggaaagataatgagcttgaggcattctacattgaa
aatgaacccgaaaagctttctcagatccaaaatttaaaagctgagagaattttcaggctg
ataatgagagataaaagacttttcaaggtcttggaaggaagcaaataccaaaatccaaaa
gagattgaaaagatgcttaaaactgcgagaattgttttaacttctgacgcagaggaatgg
aaggagtattttaaaatcaggcttcaaaacaagaaagtagagaaagcagggctttgcaga
ctctgtttgttaaatggaaaaataactgtgctaaccgaaggaaacagaataagataccac
cacgaatttatctgcgagagttgtgcagaggaagagctgaagaatgagctccgctacagg
tttagaagtcttgggatgtttgatcaagcaaagaaactcctcgaacggtttagagatttg
gacaaagtaatggctatttttgatccccgttttgacccaacaaagaacccagacgttacg
aagtgggacgaacttgagccaaaacacattaaaggtgaagagctgtccatagacgagata
aacattcccgaggaatttaagagagttttaaaagaagaaggcgtttcaaagctccttcca
gtccaaagtttggccataaaaaacggtcttcttgagggagaaaatttactggtggtttct
gcaacagcgagtggaaagactttaattggcgagcttgcaggtgtcccgaaagccattgag
ggcaagaaatttttgttccttgtcccccttgttgccttggcaaaccaaaagtacgaggac
tttaaaagaaggtattcaaaactcgggcttaaagtggccataagagtaggaatgagccgc
ataaagaccaaagatgaacttgtcgtagtagataccggaatcgatgcagatataatcgtc
ggaacttatgaaggcattgactatctccttagggcaggaagaaaaataggagacgttgga
accatagttgtagatgaaatacacatgcttgacgacgaagagaggggagccaggctcgat
ggtcttattgcacggctcagaaagctatatccaaacgcacagttcatagggctcagcgca
acaattggcaacccccaggaacttgcaaaggagcttggattaaagctcgtcctttatgat
gagaggcctgtggctttagagagacatgtgataattgcgagaaatgaaagcgagaagtgg
cgctatgtggctcagctgtgcaaggccgaaacaatgagaaaatccccgcaagggtttaaa
ggccagagtatagtgttcacgttctcaagaaagaggtgtcacgagcttgcggcgttttta
acgagtaaaggcctgaaggcaaagccgtatcacagcggtctgccctaccaccaaagaaag
ctcactgagatggagtttcaagcccaaatgctcgatgtggtagtaactacagcagcccta
ggagctggagtagattttccggcatctcaagtaatattcgaaagccttgcaatgggcaac
aaatggcttagcgttagggagttccaccagatgctggggagagcgggaaggcctctatac
catgagaagggcaaagtctatctcatagtcgagcccggaaggaaatattctgcacaaatg
gagggcactgaagacgaaatagcgtttaagctactcacagcaccaatagagcccgtttgc
gtagagtggagcgatgaaatggagcaagaccaggttttagcccactcatgtattttttca
tatttggatgatgtagaggaggttcaaaacaaatgtttgggtgcaaatcaaagcgcagaa
aaagttcttgaaaagctcgaagagtttgaatttgtgaaattaagaggcaagcttgtaaac
gttacaccctatggaagagccgttagtatgagctttttactgccaaaagaagctcagttt
ataaggaaaaacctcttcaagaagcatccaagggaaattgcgattaagctgcagccattt
gagaacgtttatctttccggagttgtccagagagagcttgaaaaggccgttaggggaagg
ctgagcagcaacatcttttccccaagctttgcttcgattttagaggagcttgaaaaagtt
ctgccagaggttagcccaaacgtacaggataagctgtttttaatttaccaggacttcttc
atgtgtgaggaagaggagtgcaccgaatacgccatggagagggtttcattgcttataatc
gagctcagaaggcaggggaaacatccgactcaaatagcggagtacttcagaagacagtat
tcccttgtggtctacccgggagacgtctttacatggcttgacggcataataaggaagctc
gaagctattgagagaatcgcaaaggtgtttagggcaaagaaagcggaattcgaggcaaga
actttgagaagagagctagaagagggaagaaagttaagaagggattaa
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