KEGG   Thermococcus aggregans: NF865_08695
Entry
NF865_08695       CDS       T10933                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tagg  Thermococcus aggregans
Pathway
tagg03030  DNA replication
tagg03410  Base excision repair
tagg03420  Nucleotide excision repair
tagg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tagg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NF865_08695
   03410 Base excision repair
    NF865_08695
   03420 Nucleotide excision repair
    NF865_08695
   03430 Mismatch repair
    NF865_08695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tagg03032]
    NF865_08695
   03400 DNA repair and recombination proteins [BR:tagg03400]
    NF865_08695
Enzymes [BR:tagg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     NF865_08695
    6.5.1.6  DNA ligase (ATP or NAD+)
     NF865_08695
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     NF865_08695
DNA replication proteins [BR:tagg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    NF865_08695
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     NF865_08695
DNA repair and recombination proteins [BR:tagg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NF865_08695
   NER (nucleotide excision repair)
    Other NER factors
     NF865_08695
   MMR (mismatch excision repair)
    Other MMR factors
     NF865_08695
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Tcp10_C PilJ_C
Other DBs
NCBI-ProteinID: USS40376
UniProt: A0A9E7SNI3
LinkDB
Position
complement(1596158..1597840)
AA seq 560 aa
MLYKELAELYRRLEKTTLKTLKTKFVADFLKKVEDPELLEIVPYLILGKVFPDWDERELG
VGEKLLIRAVSMATGVDSEEIEKSVKDTGDLGESVALALQKRKQKSFFSQPLTIKRVYDT
LVKVAETTGEGSQDKKLKYLANLFMDASPEEGKYLARTILGTMRTGVAEGLLRDAIAEAF
RVKVELVERAYMLTSDFGFVAKVAKLEGNEGLSKVKIQIGKPIKPMLAQMAANVREALIE
MGGEAEFEIKYDGARVQIHKDGDKVIVYSRRLENVTRSIPEVVKRVKNSLKPEKVIVEGE
LVAVGEGGRPRPFQYVLRRFRRKYNIEEMIEKIPLELNLFDVLYVDGKSMIDVQFIDRRK
TLESIVNTNEWIKVAENLITRNPEEAEEFYHRALDMGHEGLMAKRLDSVYEPGNRGKKWL
KIKPTMENLDLVIIGAEWGEGRRSGVLSSFLLGAYDPVRGDFVPVGKVGSGFTDEDLIEF
TKMLKPLIKREHGKFVEIEPKVVIEVTYQEIQKSPKYESGFALRFPRYVALREDKGPEDA
DTIQRIAELYQLQERMKAGK
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgttatacaaagaactagccgagctgtataggagacttgagaaaacaactctaaagact
ctaaagacaaaatttgtagcggactttttgaaaaaagttgaagaccccgagttactggaa
attgttccctatctgatcttaggaaaagtctttccagattgggacgagagagaacttgga
gttggtgagaagttattaatacgggctgtttctatggcaactggagtagacagcgaggaa
atagaaaaatccgtaaaagacaccggagatttgggagaaagtgttgctcttgcccttcaa
aagaggaagcaaaaaagctttttctcccagccccttacaataaaaagggtttatgacact
ttggttaaagttgctgagacaactggcgaaggaagccaagataaaaagctaaaatacctc
gccaatctcttcatggacgcttctccggaggaaggaaagtacctggcaaggacaatactg
gggactatgagaactggagttgcagaagggctgttgagagatgcaatagccgaggcgttc
agagtaaaggtcgagcttgttgagagggcatacatgcttacaagcgacttcggatttgtt
gccaaagtagcaaagctggaaggaaatgagggcctttcgaaagtaaaaatccaaattgga
aagccaattaaaccgatgcttgcccaaatggcggctaacgttagggaagctttaatagag
atggggggagaagcagagtttgaaattaaatacgatggcgctagagttcagattcacaag
gacggagacaaggtcatcgtttattcaaggcgtctcgaaaacgtcacaagatcaattcca
gaagttgttaagagagtcaagaattccttaaaacctgagaaggttatcgtcgagggcgaa
cttgttgccgttggagaagggggaagaccaaggccgttccagtacgtgctgagaaggttt
agaaggaagtacaacatagaggaaatgattgaaaagatacccctcgagctcaaccttttt
gacgttctctacgttgacggtaagagcatgatagacgttcaatttatagatagaagaaag
accctcgaaagcatcgtgaacacaaacgaatggataaaggtggcagaaaacctgataacg
aggaacccagaggaggcggaggaattctatcacagggctcttgacatgggccacgaagga
ttaatggcgaagaggcttgactcggtgtatgagccaggtaacagaggaaagaagtggttg
aagattaagccgacaatggagaatctcgatctagtcatcataggcgcagaatggggagaa
ggcaggaggagtggagtcctaagctcattccttttgggagcctacgacccagtaagagga
gattttgttccggttggtaaggttgggagcggattcaccgatgaagacctaatagaattc
actaagatgcttaagcccttgataaagagagagcacggaaaattcgttgagatagagccg
aaagtcgtaatagaggtaacttatcaggaaattcagaagagccccaagtacgagagcggc
tttgcattgaggttccccaggtatgttgccttgagagaggataagggacccgaagacgct
gacacaatacagaggatagcagaactctaccagctacaagaaagaatgaaagcaggcaaa
tga

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