Candidatus Nitrosotenuis cloacae: SU86_000560
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Entry
SU86_000560 CDS
T03883
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
tah
Candidatus Nitrosotenuis cloacae
Pathway
tah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SU86_000560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tah03400
]
SU86_000560
DNA repair and recombination proteins [BR:
tah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SU86_000560
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SU86_000560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
nSTAND3
AAA_23
AAA_14
NB-ARC
nSTAND1
AAA_21
AAA_33
AAA_18
NACHT
AAA_25
AAA_22
Viral_helicase1
DnaJ_CXXCXGXG
T2SSE
cobW
MeaB
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
AJZ75127
UniProt:
A0A3G1B065
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All DBs
Position
complement(644296..647109)
Genome browser
AA seq
937 aa
AA seq
DB search
MHDKLKIRGARHHNLKNLNLDIPKNKLVVISGLSGSGKSTLAFDTIYAEGQRRYVESLSA
YARQFLEMMDKPDVDSIEGLSPAISIQQKTTSKNPRSTVGTTTEIYDYLRLLYARIGIPH
CIKCGRKISNQSVESICESVFKDFDDKQVLILAPLVQRKKGTYEKLFEQMKKDGYSRARV
DGQIITLEDEMPALDRQKWHNIEIIVDRLKASKAEKSRLFEAIQTGLKAAKGSVLVSSDK
DEKIFSQNNACPYCGITIGEIEPRTFSFNSPFGSCKACHGLGVKMEFDEDLVIPDKTKSI
LDGAIVPWSGRFSAFRKQELRAVGKKFGFDLMTPMNKLKPEHLRVILHGTDQRINFHYES
QTTDSHWAYTNSFEGVLNNLQRVFMGTDSESKRDWLKQFMRDIPCNVCNGKKLKPEALAV
KVSEMGIYDVCDLSIDDCYEFFKNIKFTETEKYIAKDVLKEITERLEFLRNVGLNYLTLN
RQSSTLSGGESQRIRLATQIGSNLTGVLYVLDEPTIGLHQRDNARLIKTLVKLRDLDNTV
IVVEHDEEVIKNADWIVDLGPGAGIHGGQIVFEGTVPQIMNNHKSVTGDYLKDKNLIRLV
DKKRNQFGTITIKGAAENNLKDITVEIPLGLLVTVTGVSGSGKSTLVNEILLKALSSYFY
KSNDRPGKHKSIDGATLVDKVIAIDQSPIGRTPRSNPATYIGAFTPIRELFAGTESSKER
GYTPGQFSFNVADGRCFACEGDGVKKIEMQFLSDVYVRCDECKGKRYNSETLSILYKGKN
IADILDMTVEEALLFFENIPKIKRILQTIFDVGLGYIKLGQSSTTLSGGEAQRVKLASEL
AKRDTGKTLYILDEPTTGLHFADVQKLLDVLNRLVNLGNTIVVIEHNMDVIKNSDWIIDL
GPEGGDKGGKVIATGTPKQIASSPKSYTGQYLKKILP
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcacgataaactaaagatcagaggggcgcgtcaccacaacctcaagaacctaaatctg
gacattccaaaaaacaaactcgtagtaatatctggactttctggctctggaaaatccaca
ctggcatttgatacaatttatgccgaaggccaaagaaggtatgtagaatcgctttccgca
tatgcaagacagttcctagagatgatggacaagccagacgttgattccattgaagggtta
tcccccgccatttctattcagcaaaaaacgacatcaaagaatccccgctctactgttggc
actactactgagatctatgactatctcagattactatacgcaagaattggaatccctcac
tgcataaaatgcggcagaaagatatcaaaccagtcagtcgagtccatttgcgagtcagtc
ttcaaagactttgatgataaacaagtcctgattttagcgccactggttcagagaaaaaag
ggaacatatgagaaattatttgagcagatgaaaaaggacggctattcccgcgcacgagtc
gatggtcaaatcatcacactagaagatgagatgcctgcgctggataggcaaaaatggcac
aacatcgagatcatcgtagacaggctcaaggcatcaaaggcggaaaaaagcaggctcttt
gaggcaatccaaacaggactaaaggcagcaaagggctctgttttggtatcatccgataaa
gacgagaagatattctcacaaaataatgcctgcccatactgtggcataacaattggcgaa
atagagccaagaacattttcgttcaactcgccgtttggctcatgcaaggcatgccacggc
ttgggagtaaagatggagtttgatgaagatttggtcattccagataaaacaaaatcaatc
ctagatggcgccatagttccatggagtggaagattttccgcattcagaaagcaggagctg
cgggcagttggaaaaaagtttggctttgatctgatgactccaatgaacaagctcaagccg
gagcatctgcgagtcatcttacatggtacagaccagagaatcaactttcattacgaatca
caaacaacagactcgcactgggcttacaccaactcgtttgagggggttttgaataatctg
cagcgtgtctttatgggaaccgattctgaatcaaagcgagactggctaaagcagttcatg
cgggatattccgtgcaatgtttgcaatggaaaaaagctaaagccagaagctttggcagta
aaggtaagcgagatgggaatctatgatgtgtgtgatctttccattgatgattgctacgag
tttttcaaaaacatcaagtttaccgagaccgaaaaatacattgcaaaagatgtcctaaag
gaaataacagagcgactagaattcctaagaaacgtgggcctaaactatcttacactaaac
aggcaaagctcgactctgtctggcggcgagtcgcagcgaatcaggcttgcaacccagatt
ggctcgaatctgacaggcgtcctgtatgtattagacgagcctacaatcgggctgcaccag
cgtgacaatgccagattgatcaagactttggtaaagctgcgagacttggacaataccgtc
atagtagtagagcatgacgaggaggtaatcaaaaacgccgactggatagtggatttggga
ccaggtgctggcatccatggcggccaaattgtgtttgagggaacggttccccaaataatg
aacaatcacaaatcagtaaccggggattacctcaaggacaaaaatctcatcagactagtc
gataaaaaaagaaaccagtttggaacaataacaatcaagggtgctgccgaaaataacctc
aaggacatcacagtagagataccactaggattgctagttaccgtaactggagtgtccggc
tctggcaagtccaccctggtaaatgagatattgctcaaggcactatcatcatatttttac
aaatcaaatgatcgtccaggaaaacacaagtccattgatggggctactttggtggacaag
gtaattgcaatagaccaatccccaataggcagaactccaagatcaaaccccgcaacatac
attggcgcattcaccccaattcgggaattatttgcaggtacagaatcctcaaaggagcgc
ggctacaccccaggacagttttcattcaatgttgcagatggcaggtgttttgcatgtgag
ggtgatggcgtcaaaaaaatagagatgcagtttctatcagacgtatatgtccggtgtgac
gagtgcaagggaaagcgatacaattccgagacactctccatcctatacaagggcaaaaac
attgcagacatactggacatgacagtggaagaggcattattgttttttgagaacattcca
aagattaagcgaatcttgcagacaatatttgatgtaggtcttggctacatcaagcttggt
caatcatcaaccacactgtctggcggggaggcccaacgagtaaaactagcctcagaattg
gcaaaacgggacactggtaaaactctgtacattctggatgagccaacaacaggtctgcat
tttgcagatgttcaaaaactattagatgtgctaaacagactggtgaatcttggcaatacc
atcgtagtaatagagcacaacatggatgtgattaaaaattctgattggataattgatttg
ggaccagagggtggcgataagggcggcaaggtgattgccactggaacaccaaagcagatt
gcatccagtcccaaaagctatacaggccaatatctcaaaaagatcctgccttga
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