KEGG   Candidatus Nitrosotenuis cloacae: SU86_000560
Entry
SU86_000560       CDS       T03883                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
tah  Candidatus Nitrosotenuis cloacae
Pathway
tah03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SU86_000560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tah03400]
    SU86_000560
DNA repair and recombination proteins [BR:tah03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SU86_000560
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SU86_000560
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 RsgA_GTPase AAA_29 nSTAND3 AAA_23 AAA_14 NB-ARC nSTAND1 AAA_21 AAA_33 AAA_18 NACHT AAA_25 AAA_22 Viral_helicase1 DnaJ_CXXCXGXG T2SSE cobW MeaB BCA_ABC_TP_C
Other DBs
NCBI-ProteinID: AJZ75127
UniProt: A0A3G1B065
LinkDB
Position
complement(644296..647109)
AA seq 937 aa
MHDKLKIRGARHHNLKNLNLDIPKNKLVVISGLSGSGKSTLAFDTIYAEGQRRYVESLSA
YARQFLEMMDKPDVDSIEGLSPAISIQQKTTSKNPRSTVGTTTEIYDYLRLLYARIGIPH
CIKCGRKISNQSVESICESVFKDFDDKQVLILAPLVQRKKGTYEKLFEQMKKDGYSRARV
DGQIITLEDEMPALDRQKWHNIEIIVDRLKASKAEKSRLFEAIQTGLKAAKGSVLVSSDK
DEKIFSQNNACPYCGITIGEIEPRTFSFNSPFGSCKACHGLGVKMEFDEDLVIPDKTKSI
LDGAIVPWSGRFSAFRKQELRAVGKKFGFDLMTPMNKLKPEHLRVILHGTDQRINFHYES
QTTDSHWAYTNSFEGVLNNLQRVFMGTDSESKRDWLKQFMRDIPCNVCNGKKLKPEALAV
KVSEMGIYDVCDLSIDDCYEFFKNIKFTETEKYIAKDVLKEITERLEFLRNVGLNYLTLN
RQSSTLSGGESQRIRLATQIGSNLTGVLYVLDEPTIGLHQRDNARLIKTLVKLRDLDNTV
IVVEHDEEVIKNADWIVDLGPGAGIHGGQIVFEGTVPQIMNNHKSVTGDYLKDKNLIRLV
DKKRNQFGTITIKGAAENNLKDITVEIPLGLLVTVTGVSGSGKSTLVNEILLKALSSYFY
KSNDRPGKHKSIDGATLVDKVIAIDQSPIGRTPRSNPATYIGAFTPIRELFAGTESSKER
GYTPGQFSFNVADGRCFACEGDGVKKIEMQFLSDVYVRCDECKGKRYNSETLSILYKGKN
IADILDMTVEEALLFFENIPKIKRILQTIFDVGLGYIKLGQSSTTLSGGEAQRVKLASEL
AKRDTGKTLYILDEPTTGLHFADVQKLLDVLNRLVNLGNTIVVIEHNMDVIKNSDWIIDL
GPEGGDKGGKVIATGTPKQIASSPKSYTGQYLKKILP
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgcacgataaactaaagatcagaggggcgcgtcaccacaacctcaagaacctaaatctg
gacattccaaaaaacaaactcgtagtaatatctggactttctggctctggaaaatccaca
ctggcatttgatacaatttatgccgaaggccaaagaaggtatgtagaatcgctttccgca
tatgcaagacagttcctagagatgatggacaagccagacgttgattccattgaagggtta
tcccccgccatttctattcagcaaaaaacgacatcaaagaatccccgctctactgttggc
actactactgagatctatgactatctcagattactatacgcaagaattggaatccctcac
tgcataaaatgcggcagaaagatatcaaaccagtcagtcgagtccatttgcgagtcagtc
ttcaaagactttgatgataaacaagtcctgattttagcgccactggttcagagaaaaaag
ggaacatatgagaaattatttgagcagatgaaaaaggacggctattcccgcgcacgagtc
gatggtcaaatcatcacactagaagatgagatgcctgcgctggataggcaaaaatggcac
aacatcgagatcatcgtagacaggctcaaggcatcaaaggcggaaaaaagcaggctcttt
gaggcaatccaaacaggactaaaggcagcaaagggctctgttttggtatcatccgataaa
gacgagaagatattctcacaaaataatgcctgcccatactgtggcataacaattggcgaa
atagagccaagaacattttcgttcaactcgccgtttggctcatgcaaggcatgccacggc
ttgggagtaaagatggagtttgatgaagatttggtcattccagataaaacaaaatcaatc
ctagatggcgccatagttccatggagtggaagattttccgcattcagaaagcaggagctg
cgggcagttggaaaaaagtttggctttgatctgatgactccaatgaacaagctcaagccg
gagcatctgcgagtcatcttacatggtacagaccagagaatcaactttcattacgaatca
caaacaacagactcgcactgggcttacaccaactcgtttgagggggttttgaataatctg
cagcgtgtctttatgggaaccgattctgaatcaaagcgagactggctaaagcagttcatg
cgggatattccgtgcaatgtttgcaatggaaaaaagctaaagccagaagctttggcagta
aaggtaagcgagatgggaatctatgatgtgtgtgatctttccattgatgattgctacgag
tttttcaaaaacatcaagtttaccgagaccgaaaaatacattgcaaaagatgtcctaaag
gaaataacagagcgactagaattcctaagaaacgtgggcctaaactatcttacactaaac
aggcaaagctcgactctgtctggcggcgagtcgcagcgaatcaggcttgcaacccagatt
ggctcgaatctgacaggcgtcctgtatgtattagacgagcctacaatcgggctgcaccag
cgtgacaatgccagattgatcaagactttggtaaagctgcgagacttggacaataccgtc
atagtagtagagcatgacgaggaggtaatcaaaaacgccgactggatagtggatttggga
ccaggtgctggcatccatggcggccaaattgtgtttgagggaacggttccccaaataatg
aacaatcacaaatcagtaaccggggattacctcaaggacaaaaatctcatcagactagtc
gataaaaaaagaaaccagtttggaacaataacaatcaagggtgctgccgaaaataacctc
aaggacatcacagtagagataccactaggattgctagttaccgtaactggagtgtccggc
tctggcaagtccaccctggtaaatgagatattgctcaaggcactatcatcatatttttac
aaatcaaatgatcgtccaggaaaacacaagtccattgatggggctactttggtggacaag
gtaattgcaatagaccaatccccaataggcagaactccaagatcaaaccccgcaacatac
attggcgcattcaccccaattcgggaattatttgcaggtacagaatcctcaaaggagcgc
ggctacaccccaggacagttttcattcaatgttgcagatggcaggtgttttgcatgtgag
ggtgatggcgtcaaaaaaatagagatgcagtttctatcagacgtatatgtccggtgtgac
gagtgcaagggaaagcgatacaattccgagacactctccatcctatacaagggcaaaaac
attgcagacatactggacatgacagtggaagaggcattattgttttttgagaacattcca
aagattaagcgaatcttgcagacaatatttgatgtaggtcttggctacatcaagcttggt
caatcatcaaccacactgtctggcggggaggcccaacgagtaaaactagcctcagaattg
gcaaaacgggacactggtaaaactctgtacattctggatgagccaacaacaggtctgcat
tttgcagatgttcaaaaactattagatgtgctaaacagactggtgaatcttggcaatacc
atcgtagtaatagagcacaacatggatgtgattaaaaattctgattggataattgatttg
ggaccagagggtggcgataagggcggcaaggtgattgccactggaacaccaaagcagatt
gcatccagtcccaaaagctatacaggccaatatctcaaaaagatcctgccttga

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