Candidatus Nitrosotenuis cloacae: SU86_001170
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Entry
SU86_001170 CDS
T03883
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tah
Candidatus Nitrosotenuis cloacae
Pathway
tah03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SU86_001170 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tah03021
]
SU86_001170 (tfb)
Transcription machinery [BR:
tah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SU86_001170 (tfb)
Prokaryotic type
Archaeal type
TFB
SU86_001170 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
Zn_ribbon_3
Ephrin_rec_like
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
AJZ75222
UniProt:
A0A3G1B0Q5
LinkDB
All DBs
Position
complement(752292..753191)
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AA seq
299 aa
AA seq
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MASSQRKCPSCAKNTIQADAVTGEIFCRNCGYVAAEKLEESGPEWRSFSNDESDKSRVGA
ATSLTMHDMGLSTVIGSADKDATGKPLSASMKNSIERLRTWDSRTQAHTSADRNLRQALN
ELGKMKDKMGLADAVIEKAAYIYRKAMEKKLVRGRSIHGLIAACLYAACRNTETPRTLDD
VAESINIRRKDVARCYRLIYKELDLKMPVADPTKGIARIASVANLSEKTKRKAAEILNKA
KIIGMVAGKDPMGLAAAALYLACVSNGEIRSQKDISVAAGVTEVTIRNRCVGLKGLLDK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcctcatcacaaagaaaatgtccttcttgcgcaaaaaacaccatacaggcagatgcc
gtaactggtgaaatcttttgcagaaattgtggctatgttgccgcagaaaaactagaagag
tcaggtccagaatggagatcattttctaatgatgaatcagacaagagtcgagtcggtgca
gcaacatcattaacaatgcacgatatgggactatccacagtaataggaagtgctgacaag
gatgcaacgggaaaaccactttcagcatcaatgaaaaactccattgagcgccttagaact
tgggatagtagaacacaagcgcatacatctgctgatagaaacctaaggcaggcactaaac
gagcttggcaaaatgaaggacaagatgggtttggcggatgcagtcatagaaaaggcagcc
tacatttaccgaaaggcaatggaaaaaaagctagtcaggggaagatccattcatggattg
attgccgcctgcctttatgcggcatgtagaaacaccgaaacgccaaggacattggatgat
gtggcagaaagcatcaacatacgacgaaaagacgtagctcgatgctacaggctcatatac
aaagaactggacctaaagatgccagtagccgatccaaccaaaggaattgcaagaattgca
agcgttgcaaatctctctgagaagaccaagcgaaaggcagccgagatactaaacaaggca
aagataatcggaatggttgcaggaaaagatccgatgggcttggcagctgccgcactctat
ttggcttgtgtatccaatggtgagattagatcgcaaaaagacatctctgttgcagcgggt
gttaccgaagtcacaataagaaaccgatgtgtcggactaaaaggtctgctagataaataa
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