KEGG   Candidatus Nitrosotenuis cloacae: SU86_002660
Entry
SU86_002660       CDS       T03883                                 
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
tah  Candidatus Nitrosotenuis cloacae
Pathway
tah03030  DNA replication
tah03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SU86_002660
   03410 Base excision repair
    SU86_002660
   03450 Non-homologous end-joining
    SU86_002660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tah03032]
    SU86_002660
   03400 DNA repair and recombination proteins [BR:tah03400]
    SU86_002660
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tah04147]
    SU86_002660
DNA replication proteins [BR:tah03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    SU86_002660
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     SU86_002660
DNA repair and recombination proteins [BR:tah03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SU86_002660
Exosome [BR:tah04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SU86_002660
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc Caprin-1_dimer
Other DBs
NCBI-ProteinID: AJZ75462
UniProt: A0A3G1B1E6
LinkDB
Position
998856..999881
AA seq 341 aa
MGLDLKGLITKEKTTLESFASKVIAIDAYNTIYQFLSIIRGPDGMLLSDSQGRVTSHLSG
LFYRNINFLSLGIKPVYVFDGKSPTLKAAEVERRRQIKKEATIRYEKALAEGNMEDVRKY
AQQTTSMQDGMVEDAKKLLGLFGIPYIQAPSEGEATAAHLTKTGLAYASASQDYDSILFG
AKKLVRNFTNSGRRKLPSRNTYIEIEPEIIDTSKVLSDLGVTPEQLVDIGILIGTDFNPD
GFERIGPKTALKMIKEHGRLEDVPQIQDKLVSIPYDEIRKIFLNPQVAEVSEIKFGEPDY
IGIVKYLSDERSFSRDRAESSLNRLQKSTIKRSHTLEQWFT
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgggcttagacctaaagggactaatcacaaaggagaagaccacattagaatcgtttgca
tccaaagtgattgcaattgatgcatacaatacaatttaccaatttctctcaataattcgc
ggacctgatggaatgctattatcagattctcagggaagagtaactagccatctttcagga
ttgttctataggaacatcaattttttgtccttgggaataaaaccagtctatgtctttgat
ggcaaatcgccaacactcaaggcagccgaagtagagcgaaggcgccagataaaaaaagaa
gccaccatcagatacgaaaaagctttggctgagggcaacatggaggatgttcgaaaatac
gcccagcagaccacatccatgcaggatggaatggtagaagatgcaaagaagcttttggga
ttatttggcataccatacatccaggcaccatcggaaggcgaggcaacggcagctcacctt
accaagacaggccttgcatatgcctcggcaagccaagactatgactcgatattgtttggg
gcaaaaaagctagtccgcaactttacaaattccggcagaagaaaattacccagccgaaac
acctacatcgaaatcgagccggaaataatcgacaccagcaaagtgttatccgatcttgga
gtcacgccagaacagctagtggacattgggatcttgattggaaccgactttaatccggac
gggtttgagagaatcggcccaaagactgctctaaagatgatcaaagaacacggcagacta
gaagatgtaccacaaattcaggacaagcttgtatccattccatatgatgagatacgcaag
atctttttgaatccgcaggtagccgaggtaagtgagataaagtttggtgagccagactat
attggaatagtgaaatacctatcagatgagcgaagcttttctcgtgatagagccgaatca
tcgttgaataggctgcaaaaaagcaccataaagcgcagccatacccttgagcagtggttt
acctaa

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