Candidatus Nitrosotenuis cloacae: SU86_003120
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Entry
SU86_003120 CDS
T03883
Name
(GenBank) TATA box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
tah
Candidatus Nitrosotenuis cloacae
Pathway
tah03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SU86_003120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tah03000
]
SU86_003120
03021 Transcription machinery [BR:
tah03021
]
SU86_003120
Transcription factors [BR:
tah03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
SU86_003120
Transcription machinery [BR:
tah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SU86_003120
RNA polymerase III system
TFIIIB
SU86_003120
RNA polymerase I system
SL1/TIF-1B
SU86_003120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
B3_4
Motif
Other DBs
NCBI-ProteinID:
AJZ75529
UniProt:
A0A3G1B691
LinkDB
All DBs
Position
1083854..1084414
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AA seq
186 aa
AA seq
DB search
MPQTKPIVSIENVVASASVDQKMDLNEITRNFPDVEYHPDQFPGLVFRLKSPKTATLIFT
SGKMVCTGAKSEEMARSAVKSVVQKLRKGGIKVKKDAVVDIQNIVASINLGGKIHLEQAA
RTLPRSMYEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKKEPDVYRSVNNLHSLLEEK
NLMIYD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaacaaagccgatagtaagcatcgaaaacgtagttgcttctgcttcagtggat
cagaaaatggaccttaatgagattactcgtaattttccagatgtagagtatcatccagat
caatttcctggcttggtctttagactaaagagtcccaagactgcaaccttgattttcacc
tctggcaagatggtctgtactggtgcaaaatcagaagagatggcacgaagtgcagtcaag
tcggttgttcaaaagctcagaaagggcggaatcaaagtcaaaaaagacgcagtagttgat
atccaaaacattgttgcatcaattaatctgggtggaaaaattcacctagagcaggcagca
agaaccctaccacgcagcatgtacgagccagaacaatttccaggcctgattcaccgaatg
cttgatccaaaaaccgtgatcctgcttttctcatccggaaagctagtgtgcacaggtgcc
aaaaaagagccagatgtatatcgctccgttaacaacctacactcgctactagaagaaaag
aatctaatgatctacgactag
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