Candidatus Nitrosotenuis cloacae: SU86_003750
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Entry
SU86_003750 CDS
T03883
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
tah
Candidatus Nitrosotenuis cloacae
Brite
KEGG Orthology (KO) [BR:
tah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tah03016
]
SU86_003750
Enzymes [BR:
tah01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
SU86_003750
Transfer RNA biogenesis [BR:
tah03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
SU86_003750
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AJZ75628
UniProt:
A0A3G1B4G3
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All DBs
Position
complement(1187951..1188526)
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AA seq
191 aa
AA seq
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MSSDAEPNIEGTLFDDHVIISNKEMQNQLESKGYGETRQGKFLLKPFEALYFLFYKKLDL
SKAKKKIGFEQMLSVCSKLDENTLTKFLIYRDLRVRGYTVKDGFGFGSDFRVYERGQFGE
KGAKYLVFGLSEGKQEKVGTLQKNIEEITKMGKEPILAVIERRGEVIYYKISHVRFVENT
KNIEASSFVFS
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgatgcagaacccaacatagaaggcacattgtttgatgatcatgtaataata
tcaaacaaggaaatgcaaaaccaactcgagtccaagggttatggagagacaagacaggga
aaatttctgctaaaaccatttgaagcgctgtactttttgttttacaaaaagcttgatctg
tccaaagcaaagaaaaagattggttttgagcagatgttatctgtctgctccaagctagat
gagaatacgctgacaaagtttctcatttatcgcgatttgcgggtccgcggatatactgta
aaagatggatttgggtttggatccgactttagggtctatgagcgtggacagtttggggaa
aagggtgcaaaatatctggtctttggattatctgagggaaaacaggaaaaggttggaaca
ctacaaaaaaacattgaagagataacaaagatgggaaaagaaccaatactggcggtaata
gagagaagaggtgaggtaatctattacaaaatatcacacgtacgatttgtagagaataca
aaaaacattgaagcgtccagctttgtgtttagctaa
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