Candidatus Nitrosotenuis cloacae: SU86_004220
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Entry
SU86_004220 CDS
T03883
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
tah
Candidatus Nitrosotenuis cloacae
Pathway
tah03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SU86_004220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tah03021
]
SU86_004220
Enzymes [BR:
tah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SU86_004220
Transcription machinery [BR:
tah03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
SU86_004220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
FYVE_2
DUF7245
MRNIP
Motif
Other DBs
NCBI-ProteinID:
AJZ75706
UniProt:
A0A3G1B290
LinkDB
All DBs
Position
complement(1268344..1271691)
Genome browser
AA seq
1115 aa
AA seq
DB search
MTDPSNKRWPIIQDLLKREGIARQHLNSFDEFLERGLQSIIDEVGHIEIENAEYPYKIQL
GKVKLQQPRMMELDGSITHITPAEARLRNVSYSAPIMMEASVVEDGKILESRFVHIGDIP
VMARSNACILHNFSTQKLIEHGEDPNDPGGYFIINGSERVIVGLEDLSYNKIIVDKEKVG
GNDVYKAKVYSSIVGYRAKLELVMKNDGLIVARIPGSPVDIPVVTLMRALGLESDREIAA
ATSLVESIQNELEASFEKVAEVQTSKDSIVYISKRIAPGMLEEFQIKRAETLLDWGLLPH
LGKHQENRREKAQFLGEAACKLIELKLGWISPDDKDHYGNKVIKFAGQMLADLFRTAFRN
LVRDMKYQLERSGQKRGINAVAAAIRPGIVSDKLNNAIATGNWGRGRVGVTQLLDRTNYL
STISHLRRIQSPLSRTQPNFEARDLHPTHFGRICPSETPEGSNCGLVKNLALSAIISVNV
SPEEIIEKLYDLGSVHFTDAKEDLKRDGTRVFVDGRLVGYYKDGDKLVESLRDLRRNSKI
HPHVGISLFKPGVEGATTRLYVNCNAGRVLRPLIVIKEGKPLVTQELIDKVSKKLMSWND
LLRMGIIELIDANEEENCEITLDDKDTKKFTHLEIFPSAILGAGASIIPYPEHNQSPRNT
YESAMAKQSLGFSTPMMNTSTYVRQHLMWYPQTPIVTTKALNLLGLEDRPAGQNCVVAVL
PFDGYNIEDAIVISKAAVDRGLGRTFFYRIYEAEAKQYPGGMRDNFEIPNAEDNIRGYKG
EKAYRLLEEDGVIAGESTAVGGDILIGKTSPPRFMEEYREFESKGPYRRDTSIGVRPSET
GVVDTVVMTQSNEGGKMYKIRVRDMRIPEIGDKFASRHGQKGVVGILARYEDLPYTAEGV
IPDVLINPHAFPSRMTVGMFMESISGKAAAVRGARFDGSAFVGEKTEEIKSALEHSGLKY
SGKEMMYDGRTGKPFPVEVFIGVVYYQKLHHMVADKIHARARGQVQMLTKQPTEGRARGG
GLRFGEMERDCLIAYGASMILKDRLLDESDKSEIYVCERCGLVAYHDVKQRKYVCRVCGD
KAKVSSVSVAYAFKLLLQEMQSLNVAPRLMIKERV
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgactgacccatccaataaacgctggccaatcattcaggaccttctaaaaagagaggga
atcgcaagacagcacctcaattcttttgatgaattcctagaacgcggactacagagtatc
attgatgaggtaggacatatcgaaattgaaaacgcagaatatccatacaagattcagcta
ggaaaggtaaaactacaacaaccacgaatgatggagcttgatggttccatcacacacatc
acaccagccgaggcacgtctccgaaatgtatcatactctgcaccaatcatgatggaggca
agcgtagttgaggacggcaaaatcctagaatcaagatttgtccacattggagacattcca
gtcatggcaagatcaaacgcatgcatcttgcataatttctctacacaaaaattaattgaa
cacggagaagatccaaacgacccaggaggatatttcataattaacggatcagagcgagtc
atcgtaggactggaagatctatcatacaacaaaatcatcgtagataaggaaaaggtcggc
ggcaacgatgtctacaaagcaaaggtctattcttctattgtaggatatagagcaaaacta
gaactggtaatgaaaaatgacggactgattgtcgcaagaattcctggctcaccagttgac
attccagtagttactttgatgagagcactaggactggagtccgacagagaaattgctgct
gctacctcactagtagaatcaatccaaaacgagcttgaagcatcatttgaaaaggtagcc
gaggtccagacctcaaaggactctatagtatacatcagtaaaagaatcgcaccaggaatg
ttagaagagttccaaatcaaacgtgcagagacactacttgattggggtcttttaccacac
ctaggaaagcaccaagaaaacagacgagaaaaggcacagttcttgggcgaggcagcatgc
aagctaatcgagctaaaactaggttggatctcaccagatgacaaggaccactatggtaac
aaggtaatcaaattcgcaggacaaatgttagctgatctgttcagaactgcattcagaaac
ttggtccgtgatatgaagtaccaactcgaaagatccggacaaaaacgaggaatcaatgca
gtagcagctgctatcagacctggtattgtttctgataaactaaacaacgcaattgcaaca
ggaaactggggcaggggcagagtaggagtaacacaactgctggacagaacaaactatcta
tccaccatttcacacctcagaagaatccaatcaccattatctcgaactcaaccaaacttc
gaagctagggacttacatccaactcactttggaagaatctgtccaagcgaaacaccagaa
ggctccaattgtgggctggtcaagaacttggcactgtctgctatcatttcagtaaatgta
tcaccagaagagataatcgaaaaactatacgacttgggctcagtccactttacagatgca
aaagaagacctaaaacgagacggaactcgagtctttgttgatggacgactagtcggctat
tacaaagacggagacaagctagttgaatcactgcgtgatcttagaagaaactctaaaatc
cacccacacgtcggaatctcgcttttcaagccaggcgtagaaggcgcaaccactagacta
tacgtaaactgcaatgcaggacgtgtacttcgaccactcattgtcataaaggaaggaaaa
ccactagtcacacaagagctaatcgataaggtatcaaagaagctcatgtcttggaatgat
cttctaagaatgggcatcattgaattaatcgatgcaaacgaggaagaaaactgcgaaatc
acactggatgacaaagacaccaaaaaattcactcatcttgaaatattcccatctgcaatt
ttgggagcaggtgcatccatcatcccatatccagaacacaaccagtccccaagaaacaca
tacgagtctgcaatggcaaaacaaagcctcggcttttcaacgccaatgatgaacaccagc
acttatgttcgacaacacttgatgtggtatccacaaacaccaatcgttaccaccaaagca
ctcaatcttttaggattagaagaccgaccagcaggacaaaactgtgtagtcgcagtatta
ccatttgatggatacaacattgaagacgcaatagtaatcagcaaggcagcagtggacagg
ggcctgggtaggacatttttctatagaatctatgaggcagaagcaaaacaatatcctggt
ggaatgcgagacaacttcgagattccaaacgccgaggacaacatccgaggctacaaggga
gaaaaagcatatcgattactagaagaggacggagtaattgcaggcgaatcaaccgcagtt
ggcggagacattctgattggcaagaccagtcctccaagattcatggaagaatatcgcgaa
ttcgagtccaaaggaccatatcgacgtgacacatcaattggtgttagaccatcagagaca
ggtgttgtagatactgtagtcatgacccagtccaatgagggcggcaaaatgtacaagatc
agagttagagatatgagaattccagagattggtgacaagtttgcgtcaagacatggacaa
aagggcgtggttggcatacttgcacgatacgaagacttgccatacactgcggaaggagtt
atcccagacgttttgatcaacccacatgcattcccatcacgtatgacagttggaatgttc
atggagtcaatttctggcaaggcagctgcagttaggggagcaagatttgatggctctgca
tttgttggagaaaagacagaagagatcaaatcagcactagaacactctggtctgaaatat
tcaggtaaagaaatgatgtatgatggcagaactggcaaaccattcccagtagaggtcttc
atcggtgttgtatattatcagaaactgcaccacatggttgcagacaaaatacatgcaaga
gcaagaggccaagtccaaatgctgaccaagcagccaacagaaggtcgtgcaaggggtgga
ggactcagatttggtgaaatggagcgagactgcctaattgcatatggtgcatctatgatt
ctcaaagacagattactggacgaatcagacaaatcagaaatttacgtctgtgagcgatgt
ggactggttgcatatcatgatgttaaacaaagaaaatacgtttgccgagtttgcggagac
aaggccaaagtctcctcagtatcagtagcgtatgcattcaagctattattgcaagaaatg
cagagccttaacgtagcaccaagactaatgataaaggagagagtgtaa
DBGET
integrated database retrieval system
