Candidatus Nitrosotenuis cloacae: SU86_004640
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Entry
SU86_004640 CDS
T03883
Name
(GenBank) RNA-binding protein
KO
K07573
exosome complex component CSL4
Organism
tah
Candidatus Nitrosotenuis cloacae
Pathway
tah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SU86_004640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tah03019
]
SU86_004640
Messenger RNA biogenesis [BR:
tah03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SU86_004640
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
SU86_004640
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ECR1_N
NB
Prok-RING_1
Cas12f1-like_TNB
Zf_1st_IFT121
Motif
Other DBs
NCBI-ProteinID:
AJZ75773
UniProt:
A0A3G1B4B6
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All DBs
Position
1353354..1353899
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AA seq
181 aa
AA seq
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MNDFVMPGEKLGFIEEIEGGSNTFDDGDTIRASSAGIAEVDKKTKIVQVRNGRQLSIPKK
GDIVIGTVAMMLPSMIAVAIHYLNGKPNSSGVECICQNPDRKRIIARMNDVVALKIETHL
NGAIHATIDEPELGVLFTKCNVCAGNVVPMRDRIKCPNCGFMEDRKISTNYEKADFIKLR
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattttgttatgcctggtgaaaagctgggatttattgaagaaattgaaggtggt
tccaacacgtttgatgacggagatactatcagagcatcttctgcaggaattgcagaggtg
gacaaaaagaccaaaatcgttcaagtcagaaatggaagacagttatccatcccaaaaaaa
ggagacattgtgataggcaccgttgctatgatgctcccatccatgattgcggttgcaata
cactatctaaatggcaagccaaattcatctggagtcgagtgcatttgccaaaacccagac
agaaaaagaatcattgctagaatgaacgatgttgttgcactaaaaattgagactcacctt
aatggtgcaattcatgctacaatagatgagcccgagcttggcgttttatttacaaaatgt
aatgtttgtgctggaaatgtagttcccatgcgagacagaataaagtgtccaaactgtggg
tttatggaagacaggaaaatttctaccaactacgaaaaggcagatttcataaaactacga
gagtaa
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