Candidatus Nitrosotenuis cloacae: SU86_005125
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Entry
SU86_005125 CDS
T03883
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
tah
Candidatus Nitrosotenuis cloacae
Pathway
tah03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SU86_005125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tah03021
]
SU86_005125
Transcription machinery [BR:
tah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
SU86_005125
Prokaryotic type
Archaeal type
TFE
SU86_005125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
D5_N
Sigma70_r3
TrmB
IBR
DUF1922
Imm33-like
Zn_ribbon_Com
zf_CopZ
Motif
Other DBs
NCBI-ProteinID:
AJZ76658
UniProt:
A0A3G1B4Y8
LinkDB
All DBs
Position
1427545..1428060
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AA seq
171 aa
AA seq
DB search
MVESYEDPFVRISAMIGGDEYLKVARALLKAEDATDEEIASSTGLRINMVRKVLYDLFGK
ALITGIRVKDERKGWFVYRWRSRKDEVENFIENQKKKISERLQQRLDYENSSQFYHCGNE
DCPRITFETALEQFFKCPRCGGVVNLKKNDKLKKALESKVTEIRNDMRRQL
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaatcttacgaggacccatttgttagaatctctgcaatgattggcggagacgaa
tacctcaaagtagcccgcgcattactaaaagcagaagacgcaacagacgaggaaattgcc
agttcgaccggactgagaataaacatggtaagaaaagttctctatgatttgtttggcaaa
gcactcatcacaggaattcgcgtaaaggatgagcgaaagggctggtttgtgtacagatgg
cgctcaagaaaggacgaagttgagaatttcattgaaaaccaaaagaaaaagatctcagag
cgactccagcaaagactagactatgagaactcgtcgcaattttatcactgtggaaatgag
gactgtccaagaattacatttgagacggcactggaacagttcttcaagtgtccaaggtgt
ggcggcgtggtgaacctaaagaaaaacgacaagctcaaaaaggcactagaatcaaaggtc
accgaaataagaaacgacatgcgtcgtcagttatag
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