Candidatus Nitrosotenuis cloacae: SU86_009250
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Entry
SU86_009250 CDS
T03883
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
tah
Candidatus Nitrosotenuis cloacae
Brite
KEGG Orthology (KO) [BR:
tah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tah03400
]
SU86_009250
DNA repair and recombination proteins [BR:
tah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
SU86_009250
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
AAA_10
TrwB_AAD_bind
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AJZ76760
UniProt:
A0A3G1B720
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Position
complement(542687..544210)
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AA seq
507 aa
AA seq
DB search
MTIGVVIGESKPTSVTAQTSRPLSVGEYVVIDSQDGKLLGLVERSFVTSAALTDIHNFDE
AIESKEIADINSRDKSFTAKVGILGYLAQLQKSIVVLPAIPPIPGTAILSATRDDLGNIF
APQKDEWVKIGSLLRNSQIEAKVNLNKIVSRHLGILAMTGMGKSNLVSLLAKQISTLDGT
LIIFDYHNDYSDLRIPGINVIDAKINPRLLDANTLADVLEIRENADIQQRVLRLAFTPDV
KEAQNFWDALDHNVAMIGANPERKDDRHSADRVQDKIDDARHRFADVLDPDIMDPLGLIK
EGKVNVLNISELSEKQANVALAYYFQELLTDRKSALMAKNTKSKTAKRYRFDSPIFVIIE
EAHVFIPKGEDTHTKYWAAKIAREGRKFGLGLCIVSQRPRNIDPNVLSQMGSLAVMKIVQ
EDDQHQIASAAESISRDLINQLTSLNVGDAVFVGQWVNLPAIVHIEEVKDKAIGSDKNAV
SEWRGTKKFEKIAESTQGLIQKDLLLD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgacgattggtgttgtgattggcgagtccaagccaacatctgttactgcccaaacatct
cggccactctctgttggagaatatgtcgtgattgattctcaggatggtaagctgcttgga
ttagtagagagatcatttgttaccagcgcagcactgactgatattcataattttgatgag
gcaatagaaagcaaagagattgcagacattaactctcgcgacaaaagctttactgccaaa
gtcggcatacttggatatttggcgcagctgcaaaaaagcatcgtagtattgcccgcaatt
ccaccaattccaggaactgcaattctgagtgccacaagagatgatctaggaaacattttt
gctccacaaaaagacgaatgggtgaaaatcggcagcctgcttagaaactcacagatagag
gccaaggtgaatctgaacaagatagtatcacggcatttgggaatacttgcaatgactgga
atgggaaaaagcaacctcgtgtcactgttggcaaagcaaatctctacactagatgggaca
ctaataatatttgattatcataatgattactctgatcttcggattcctggaattaatgtg
attgatgcaaaaataaatccaagactattagatgcaaacacactagcagatgttttagaa
atcagagaaaatgcagacattcagcaaagggttttgagattggcatttaccccagatgtc
aaagaggcccagaatttttgggatgcgctagaccacaatgttgcaatgattggcgcaaat
cctgaaagaaaggatgataggcattcagcagaccgagtccaggataagatagacgatgcc
aggcacagatttgccgatgttttggacccagacatcatggacccgctagggctaatcaag
gaaggcaaggtaaatgtgctgaacatttcagagctatcagaaaagcaggcaaatgtggcc
cttgcatattatttccaggaattgctaaccgacagaaaatccgctctcatggcaaagaac
acaaagagcaaaacggcaaaaagatacagattcgactcgccaatatttgtaataattgaa
gaagctcatgtgttcattccaaagggtgaggacacccacacaaaatactgggctgccaag
attgcccgtgagggacgcaagttcggcctagggttgtgtatagtgtcacaacgaccaaga
aacattgatccaaatgtattatcccagatgggctcactggcagtaatgaaaatagtccag
gaagacgaccagcatcaaatcgcatccgctgcagagtcaatcagcagggatttgataaac
cagctaacatcgctaaatgtaggcgatgccgtatttgtcggacagtgggtgaacctgcca
gcaatagtgcacatagaggaagtaaaagacaaggcaattggctctgacaaaaatgcagtg
tcagagtggcgcggaacaaaaaagtttgagaaaattgccgagtccacgcaaggattaata
caaaaagatctattacttgattga
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