Thermanaerovibrio acidaminovorans: Taci_0478
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Entry
Taci_0478 CDS
T01129
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
tai
Thermanaerovibrio acidaminovorans
Pathway
tai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Taci_0478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tai03019
]
Taci_0478
Messenger RNA biogenesis [BR:
tai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Taci_0478
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
RNase_J_C
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ACZ18714
UniProt:
D1B8W1
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All DBs
Position
507429..509147
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AA seq
572 aa
AA seq
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MGKESGGSSPSKPNRRRGKGKPSNRGKELKWIPLGGMGEIGKNISALQYGDEMIVIDCGL
KFPEEDMLGIDLLIPDVSFLEQNRGKIRGIFITHGHEDHIGGLPYVLPKLDVPVYATRLT
IGLIKNKLAEVCPRYKPVFHEIGAGDTVDLGSFSVRAIAVCHSIPDALAYGIRTPAGVVL
HTGDFKLDAQPIDGRTTDYGAFAELGREGVLLMLSDSTNVEREGFTQSERTVGRTFEQLF
RLHKDKRIVIATFASNLHRAQQVFNIAMRYNRKVALVGRSMIAYVDLARKLGYVSAPDDL
FIPAQEADGMQPNRVVVLTTGSQGEPFSGLVLMSKGEHRQIKLGNRDLVVISATPIPGNE
KLVSRTINMLFSCGCEVVYERDQAIHVSGHASREELKMMISLVNPRCFVPVHGEYRHQVR
HAQLARDLGVPAKGVFVMSNGDVLSLSQGGKGSVEGRVQAGTIMVDGLAVGEFQGSLLKE
RRELAQDGILTIAVALGPDGSVRGVDMDSRGFLHRQDAKDLYGELERAVVKALEAPMGDD
AMRTAIRKSAREVLSRYTKGYPAIVPLLVRQG
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaatccggcggatcctcccccagcaagcccaacaggcggcgggggaagggt
aagccatccaatcgaggcaaggaactgaagtggatacccctgggtgggatgggggagata
ggcaagaacatatcggccctccagtacggggacgagatgatcgtcatagactgcggcctc
aagttccccgaggaggacatgctggggatagatctcctgatcccggacgtgtcgttcctg
gagcagaaccggggcaagataaggggcatattcatcacccacggtcacgaggaccacata
gggggtcttccctacgtgctgcccaagctggacgtgccggtttatgccacccggctcacc
atagggctcataaagaacaagctggcggaggtctgcccccgctacaagccggtcttccac
gagataggggcgggggacacggtggacctggggagcttctcggtgagggccatagcggtc
tgtcactcgattcccgatgcgcttgcctacgggatcaggacccccgcgggggtggtgctg
cacaccggggacttcaagctggacgcccagcccatagacggcaggaccaccgactacggg
gccttcgccgagctgggacgggagggggttttgctgatgctctcggactccaccaacgtg
gagagggagggcttcacccagtcggagaggaccgtggggcgcaccttcgagcagctcttc
cggcttcacaaggacaagaggatcgttatagccaccttcgccagcaacctccaccgggcc
cagcaggtcttcaacatagccatgaggtacaaccggaaggtggcccttgtggggcgcagc
atgatagcctacgtggacctggccaggaagctggggtacgtctccgctccggacgacctg
ttcatccctgcccaggaggcggacgggatgcaacccaaccgggtggtggttctaaccacc
ggaagccagggggagcccttctccggattggtcctcatgagcaagggagagcaccgacag
atcaagctcggaaatcgagatctggtggtcatatctgcaacccccataccgggcaacgag
aagctggtgagccgcaccataaacatgctcttctcctgcggatgcgaggtggtctacgag
agggatcaggccatccacgtgtccggccacgcctccagggaggagctcaaaatgatgata
agtctggtaaatccccggtgcttcgtgccggtccacggagagtaccggcatcaggttagg
catgcccaactggccagggatctgggggtccccgccaagggggtcttcgtaatgtccaac
ggggatgtgctctccctgtcccagggcggaaagggcagtgtggagggccgggtccaggcg
ggcaccataatggtggatgggctggcggtgggtgagttccaggggagcctcctcaaggag
cgccgggagctggcccaggacgggatccttaccatagcggtggccctggggcccgacggt
tccgtccgtggcgtggacatggacagccggggcttcctgcaccggcaggacgccaaggac
ctctacggcgagttggagagggcggtggtgaaggccctggaggcccccatgggggacgat
gccatgaggaccgccatccgcaagagtgccagggaggtgctgagccgctacaccaagggc
tatccggccatagtgcccctgctggtccggcaggggtga
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