Thermanaerovibrio acidaminovorans: Taci_0508
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Entry
Taci_0508 CDS
T01129
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tai
Thermanaerovibrio acidaminovorans
Pathway
tai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Taci_0508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tai03019
]
Taci_0508
03009 Ribosome biogenesis [BR:
tai03009
]
Taci_0508
Enzymes [BR:
tai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Taci_0508
Messenger RNA biogenesis [BR:
tai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Taci_0508
Ribosome biogenesis [BR:
tai03009
]
Prokaryotic type
rRNA helicases
Taci_0508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACZ18744
UniProt:
D1B8Z1
LinkDB
All DBs
Position
complement(543509..545185)
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AA seq
558 aa
AA seq
DB search
MNTNKRFDQYPLRDELLSALRRKGFEHPMPVQVSMLEDPTLVDGDLIVQAKTGSGKTLAF
ALPLLNRMEFGERSPKVLVLSPTRELALQTAREFQWLGYDLRIRVASLVGGMDMERQVKA
LREGAAVVVGTPGRVLDHIRRGTFRADLVESLVLDEGDHMLDLGFKDELEDIMAAMTQVE
RSWLFSATMPEEVVTLAKQYLDAPRKISLVEDAAKHDDIVQRAYIIPARRRFEGLANVLL
FERPRRGIVFCATKLQTQELAERLCDEGFKASALHGDMTQRERNMALENLRRGRSQILVA
TDVAARGLDISGVSHVIQFGLPGCLETFIHRSGRTGRAGQEGRNLILLTAREAGEFRGMI
RGTSLEVEWLPAPDAEELESLTRAEIERWCLENPAEGEDYMDWAEEILQREDAQLIVAGL
LSRSFEGIPKGYSIQEDVQAEMARSRRADRPKARDQRPLRKLVSGSVTMRFSSGREDGWE
VGPLLGALCRGLGIRREDVGNIKLKDRCAFVELSPYAASQIERRRDNLAREGLDGFSRSE
PRQNHGTQRPRTPSRNRY
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaccaacaaacgtttcgatcagtatccccttcgggatgagctcctcagcgccctc
aggcgcaaggggttcgagcatcccatgccggttcaggtcagcatgctggaggaccccacc
ctggtggacggggacctcatagtccaggccaagaccggctccggcaagaccttggccttc
gccctcccccttctcaaccgaatggagttcggcgagaggtcccctaaggtgctggtcctc
tcccccacccgggagctggcccttcagaccgcccgggagttccagtggctgggttacgac
ctcaggatccgggtggcctccctggtgggtggcatggacatggagaggcaggtcaaggcc
cttcgagagggggccgcggtggtggtgggcaccccagggcgggtgctggaccacataagg
cggggaaccttccgggcggacctggtggagagcctggtgctggatgagggggaccacatg
ctggacctgggcttcaaggacgagctggaggacatcatggccgccatgacccaggtggag
agaagctggctcttctccgccaccatgccggaggaagtggtgaccctggccaagcagtac
ctggacgccccccggaagatctccctggtggaggacgcggccaagcatgacgacatagtc
cagagggcctacataatacccgccagacggcggttcgaggggctggccaacgtgctcctt
ttcgagaggccccgccgggggatcgtgttctgcgccaccaagctacagacccaggagctg
gcggagcggctatgcgacgagggcttcaaggcctcggcccttcacggggacatgacccag
cgggagaggaacatggcgctggagaacctgcgccgtggaaggagccagatccttgtggcc
accgacgtggcagcccgggggctggacataagcggcgtgtcccacgtgatccagttcggc
ctgcccgggtgcctggagaccttcatccaccggagcggcagaaccggccgggcgggccag
gagggccgcaacctcatcctactcaccgcccgggaggcgggggagttccgggggatgatc
cggggcacctccctggaggtggagtggctccccgctcccgacgcagaggagctggagtcc
ctcacccgggcggagatcgagcgctggtgcttggagaaccccgccgagggggaggactac
atggactgggcggaggagatactccagcgggaggacgcccagctgatcgtggcggggctg
ctcagccgctccttcgaggggatccccaagggctactccatccaggaggacgtccaggcg
gagatggccaggagccggagagccgacaggccaaaggcccgggaccagcgaccccttagg
aagctggtgtccggctcggtaaccatgcgcttctcctccggaagggaggacggatgggag
gtgggccccctgctgggggccctctgcagggggctcggaatacggcgggaggacgtgggc
aacataaagcttaaggaccgttgtgccttcgtggagctctccccctacgcggcatcccaa
atagagcgccggagggacaacctggccagggaggggctggatggcttctccaggtcggag
ccccgccagaaccatgggacccaacggcccaggaccccgtccagaaaccgctactag
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