Thermanaerovibrio acidaminovorans: Taci_1191
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Entry
Taci_1191 CDS
T01129
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tai
Thermanaerovibrio acidaminovorans
Pathway
tai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Taci_1191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tai03021
]
Taci_1191
03400 DNA repair and recombination proteins [BR:
tai03400
]
Taci_1191
Enzymes [BR:
tai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Taci_1191
Transcription machinery [BR:
tai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Taci_1191
DNA repair and recombination proteins [BR:
tai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Taci_1191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
SHOCT
Motif
Other DBs
NCBI-ProteinID:
ACZ19423
UniProt:
D1B5Y2
LinkDB
All DBs
Position
complement(1229977..1234932)
Genome browser
AA seq
1651 aa
AA seq
DB search
MAHKEIVGVRVKLSSPERIRAISCGEVKKPETINYRTLRPEKDGLFCERIFGPTRSFECA
CGKYKRSGPKFKGVVCDRCGVEVTDNRVRRERMGHIELAAPVVHIWYLRGIPSRLSLLIG
TSTKDLERVVYFAPNRRREAAYKVVVEGRRTDLVRRGDVISASEERIHRFYDSKFKAEEA
FRVVRVDEIPVAEGDVITLHQLARYRAEFGDGIFDTERAYQVRGEEGTRVVPQSKVSPED
DASPMEINGQEAYVVVSAVRLPFSRNDVLSKGECELYMQKFPGRFQAQPETITLEDPCHI
VIEKGESPFERGDIITESEEYLCSRYDKSFMAGIGAEGVLELLKRIDLDDLATSLREEIA
ESSGQKKRKLVKRLQVVEDFRKSDSRPEWMILSVLPVIPPDLRPMVQLDGGRFATSDLND
LYRKVINRNNRLKKLMELRAPEIIIRNEKRMLQESVDALIDNGRRGKPVPGAGGRPLKSL
TDLLRGKKGRFRQNLLGKRVDYSGRSVIVIGPNLKIYQCGLPKQMALELFKPFVVHKLVE
RGLAANVKNARRLIERGKDEVWAILEEIIKDHPVLLNRAPTLHRLGIQAFEPVLIEGKAI
RLHPLVCTAFNADFDGDQMAVHVPLSLEAQAEARILMLSSNNLLSPSSGKPIVTPTQDII
LGVYYLTGMKPDLKGDGMYFRDEEDVLSALDHGVVHVNARVYVRNRPEWGLGEDKWLETS
PGRVVFNCAMPEKLRFINRQLGKKDFGALLDRAYDLVGQAAMVEMLDGIKQLGYKWSTKS
GISLGIGDVIVPPQKESIVRETMVHEEELSAQYDMGILTEDEYMRQKDALWSEAVKNIVD
KIVDNMDVDNPLRIMVDSGARGSKSQVAQMAGIRGLMADPSGKIIDYPIVSNFRDGLNML
EYFISTHGARKGLSDTAMRTAKSGYLTRRLVDVAQDLIITEEDCGTDRGVEMRPLKQESK
VVIPLSERVAGRVALRDVILSDGTCLVRAGQEIDQETAKALDRAGVESVWVRSPLTCALR
HGICRTCYGKDLATRHRVAIGEAVGVVAAQSIGEPGTQLTMRTFHTGGVRQFTGEDITQG
LPRIEQLFEVRKPKKAALIAEHDGVVVERREGEGKKKLVVAVPREDGGEDRVVYTLPASQ
NLLPGVEEGAPIHRGQVLTEGYIDPQQLLEVEGLEAVQRYILDGIQDVYRSQGVSINDKH
IEVILRKVAPVNRVRVIEEGDSSFVAGELVWKEDLEAESRRISEQNARFLEEASFLCGAV
VKDAVGSLDGTGITRDEELTMDKLGRLLSPGVGASELICQDREGLLRVIVGEASFKRELE
GLELLSDLPVADGCVISAGSRLTASDASRIVAMGPQPLLVKDLKAMEDMVGEVYLAEDVT
VDGRVLSLKDRLFDLEVFQELRSLPVESVRIWRNPERLDLCKDVYEYLIGNYLSQRVLRV
ITRDGAVTEPLDNRISMEIAEGIRSGEVEAIELDGNNVVSRERVLKALLTEKVYGKVLLE
PVRDVDGNVVVPSGREVSHQVMDQIVAACPGEMVVRPILAQGEHRRLIQRISFVRRLREL
PTWKPVLHGITKAALATDSFLSAASFQQTAQVLASAAVRGEVDNLLGLKENVIIGLLIPS
GTGIDKYRKVQVVEPRTGEGGSDLFESGESA
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atggctcacaaggagatagtaggcgttcgggtcaagctgtcctcgccggagaggataagg
gccatatcctgcggcgaggtgaagaagcccgagacaataaactacaggaccctcaggccc
gagaaggacggtctcttctgcgagaggatctttggtcccacccgtagcttcgagtgcgcc
tgcggcaagtacaagcgcagcggccccaagttcaagggggtggtctgcgaccgttgcggc
gtggaggtgaccgacaaccgggtccgccgggagcggatggggcacatagagctggcggcg
ccggtggtgcacatatggtacctcaggggcatccccagcaggctgtcgctgctgataggc
acctccaccaaggacctggagcgggtggtctacttcgcccccaacaggaggcgggaggcg
gcctacaaggttgtcgtggagggccgcaggaccgacctggtgcgccggggggatgtgatc
tccgcttcggaggagcggattcaccggttctacgactccaagttcaaggcggaggaggcc
ttccgggttgtccgggtggacgagattcccgtggcggagggggacgtgataacccttcac
cagctggcccgctatcgggcggagttcggcgacgggatcttcgataccgagagggcctac
caggtccggggtgaggaggggactcgggtggttccccagtccaaagtctccccggaggac
gacgcgtcccccatggagataaacggccaggaggcctacgtggtggtgagcgccgtccgg
ctccccttctcccggaacgacgtgctctccaagggggagtgcgagctctacatgcagaag
ttccccggccggttccaggcccagccggagacgatcaccctggaggatccgtgccacata
gtgatcgagaagggggagtcccccttcgagcggggtgacatcataaccgagagcgaggag
tacctgtgctcccggtacgacaagtccttcatggcgggcataggggccgagggggtcctg
gagctgctcaagcggatcgacctggacgacctggccaccagcctccgggaggagatagcc
gagtcctcggggcagaagaagcgcaagctggtgaagcgtctccaggtggtggaggacttc
cggaagagcgacagccggccggagtggatgatcctgtcggtcctgccggtgatccccccg
gatcttaggcccatggtccagttggacggggggcggttcgctacctcggacctgaacgac
ctgtaccggaaggtgatcaaccggaacaatcggctcaagaagctgatggagctccgggcg
ccggagatcataatccggaacgagaagaggatgctccaggagtcggtggacgccctgata
gacaacggccgccggggcaagccggtgcccggtgcgggcggtcggcccttaaagagccta
acggacctgctgcggggcaagaagggccggttccgccagaacctgctgggcaagcgggtg
gactattcgggccgttcggtcatagtcatagggccgaaccttaagatataccagtgcggt
ctgcccaagcagatggcgctggagctgttcaagcccttcgtggtgcacaagctggtggag
cgggggcttgcggccaacgtgaagaacgcccggcgcctcatcgagcggggcaaggacgag
gtctgggccatcctggaggagataataaaggaccacccggtgttgctgaaccgggccccc
accctccacaggctgggcatccaggcctttgagccggtgttgatcgagggcaaggccata
aggctacaccccctggtctgcaccgccttcaacgcggacttcgacggggaccagatggcg
gttcacgtgcccctgtcgctggaggcccaggcggaggcccggatactgatgctctcctcc
aacaacctgctctccccctccagcgggaagcccatagtgacccccacccaggacataatc
cttggggtctactaccttacggggatgaagccggatctcaagggggacggcatgtacttc
agggacgaggaggacgtgttgtccgccctggaccacggggtggtgcacgtgaacgcccgg
gtgtacgtccgaaaccgtcccgagtggggccttggggaggacaagtggctggagaccagc
cccggtcgggtggtcttcaactgcgccatgcctgagaagctccggttcataaaccgtcaa
ctgggcaagaaggactttggcgccctgcttgaccgggcctacgatctggtgggccaggcg
gccatggtggagatgttggatgggatcaagcagctggggtacaagtggtccaccaagagc
ggcataagcctcggtataggggacgtcatagtgcccccccagaaggagtccatagtcagg
gagaccatggtccacgaggaggagctgtccgcccagtacgacatgggcatccttaccgag
gatgagtacatgaggcagaaggacgccctgtggtccgaggcggtcaagaacatagtggac
aagatcgtggacaacatggacgtggacaacccgctgaggataatggtggactccggggcc
aggggatccaagagccaggtggcccagatggcgggtatccggggcctgatggcggacccg
tcgggcaagataatcgactaccccatagtgtccaacttccgggacgggctcaacatgttg
gagtacttcatatccacccacggggcccggaaggggttgtcggacaccgccatgaggacc
gccaagtccggatatctgaccaggcgtctggtggacgtggcacaggacctgataataacc
gaggaggactgcggcaccgaccggggggttgagatgaggcccctcaagcaggagtccaag
gtggtgatccccctgtccgagcgggtggcgggtcgggtggccttgagggacgtgatcttg
tcggacggcacctgtctcgtcagggcgggtcaggagatagaccaggagaccgccaaggcg
ctggaccgggcgggggtggagagcgtgtgggtgaggagtcctctcacctgcgctctcagg
cacggcatatgcaggacctgctacggcaaggacctggcgacccgtcaccgggtggccatc
ggcgaggcggttggagtggtggccgcccagtccataggtgagcccggcacccagctgacc
atgcggaccttccacaccggaggggtccggcagttcaccggtgaggacataacccagggt
ctgccccggatagagcagctcttcgaggtccggaagcccaagaaggcggcgctgatcgcc
gagcacgacggcgtggtggtggagcgccgggagggggagggcaagaagaagctggtggtg
gcggtcccccgggaggacgggggcgaggatcgggtggtctacaccctgcccgcctctcag
aacctgttgcccggcgttgaggagggggcccctatccaccggggtcaggtgctgaccgag
ggctacatagatccccagcagctgctggaggtggaggggctggaggcggtccagcggtac
atactggacggaatccaggacgtgtaccgttcccagggggtctccataaacgacaagcac
atagaggtgatactccggaaggtggcgccggtgaaccgggtccgggtcatcgaggagggg
gacagctccttcgtggcgggtgagctggtctggaaggaggacctggaggcggagagccgc
cggatatcggagcagaacgccaggttcctggaggaggcctcgttcctctgtggcgcggtg
gtgaaggacgcggtgggttccctggatgggaccggcataacccgggacgaggagctaacc
atggataagctggggcggctcctgtctcccggggttggtgcctcggagctgatctgccag
gaccgggaggggctacttagggtcatcgtgggggaggcctccttcaagcgggagctggag
gggcttgagctcctgagcgacctgccggtggcggacgggtgcgtcatatccgccggcagc
aggctaaccgcctcggacgcctcccggatagtggccatgggcccccagccgctattggtg
aaggacctcaaggccatggaggacatggtgggggaggtctacctggcggaggacgtgacg
gtggacggtcgggttctgagccttaaggaccggctgttcgatctggaggtcttccaggag
ctccggtccctgccggtggagtccgtgcggatctggaggaacccggagcggctggacctc
tgcaaggacgtctacgagtacctgataggcaactacctgtctcagcgggtgcttagggtc
ataacccgggatggggcggtgacggagccgctggacaaccggatcagcatggagatagct
gaggggatccggtccggggaggtagaggccatagagctggacgggaacaacgtggtctcc
cgggagagggtcctcaaggcgctcctcaccgagaaggtctacggcaaggttctgctggag
cccgtcagggacgtggatgggaacgtggtggtgccaagcggccgggaggtgagccaccag
gtcatggatcagatagtggccgcgtgtcccggggagatggtggtccgtccgatcctggcc
cagggtgagcatcggaggctgatccagcggatctccttcgtgaggcgtcttagggagctg
cccacctggaagccggtgctacacgggatcaccaaggcggcgctggccaccgacagcttc
ctttccgccgcgtcgttccagcagaccgcccaggttctggcctccgcggcggtgcgggga
gaggtggacaacctgcttggactcaaggagaacgtgataataggtctcctgatcccctcc
gggaccgggatagacaagtaccggaaggtccaggtggtggagcccaggaccggggagggt
ggtagcgacctcttcgagtccggggagtccgcttga
DBGET
integrated database retrieval system
