Terribacillus sp. DMT04: KS242_02940
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Entry
KS242_02940 CDS
T07391
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
taid
Terribacillus sp. DMT04
Pathway
taid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KS242_02940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taid03019
]
KS242_02940
03009 Ribosome biogenesis [BR:
taid03009
]
KS242_02940
Enzymes [BR:
taid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KS242_02940
Messenger RNA biogenesis [BR:
taid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KS242_02940
Ribosome biogenesis [BR:
taid03009
]
Prokaryotic type
rRNA helicases
KS242_02940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
GRP
AAA_19
PIN_2
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QXE03318
LinkDB
All DBs
Position
538767..540212
Genome browser
AA seq
481 aa
AA seq
DB search
MGFEEATPIQAETIPSALEGKDVLGQAQTGTGKTAAFGIPMISKIDRSKRQIQGLVIAPT
RELAIQVGEELHRLGQFKGIKTLPVYGGQHMERQIRALREGPHIVVATPGRLLDHIRRKT
INFSGVHTAVLDEADEMLNMGFIDDIREILSSIPEERQTLLFSATMPKEIRDIGTKLMKD
PTEVKVKAKEMTVTNIDQSYIEVQERQKFDTLSNLLDIDEPKLAIIFGRTKKRVDEVTEG
LQARGFRAEGIHGDLTQGKRMSVLNKFKNGRVEVLVATDVAARGLDISGVTHVYNFDIPQ
DPESYVHRIGRTGRAGKGGQAVSFITPREVPHLHLIEKTTKSKIARKTAPTNDEAAQGQQ
QIAIEKMMRTIESKDLQAYNDKADELINQFDAQTVVAAALKMLTKERRNAPVRITSIAPI
SVKGNFKDKKKYRGGGSRGGDRRNSGGGRSNGGGKSRSRNYQGQGKRSSGGYRGKRNNEN
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgaagaagcgacgccgattcaagccgaaacgattccttccgcactagaagga
aaagacgtactaggtcaagcgcagactggtactggtaaaactgctgccttcggtattccg
atgatcagcaaaatcgatcgttctaaacgccaaatccaaggccttgttattgcaccaaca
cgtgagcttgctatccaagtaggagaagagcttcaccgtcttggtcaattcaaaggtatt
aaaacacttccagtttatggcggtcagcacatggaacgtcagattcgtgctctaagagaa
ggtccgcacatcgtagttgcgactcctggacgtctgcttgaccatattcgtcgtaaaaca
attaatttcagcggcgttcatactgctgtattggatgaagcagatgaaatgctgaacatg
ggcttcatcgacgatatccgtgaaatcctttcttctattccagaagagcgtcagacattg
ctgttcagtgcaacaatgccgaaggaaatccgtgatatcggtacaaaactgatgaaagac
cctacagaagtcaaagtaaaagcaaaagagatgactgtaacaaacattgatcagtcttat
atcgaagtacaagaaagacaaaaattcgatacactttcaaacttgcttgatattgatgag
ccaaaattggcaatcatcttcggcagaacgaaaaagcgtgttgatgaagtaacagaaggt
ttacaagctcgcggattccgcgcagaaggtattcatggcgatcttacacaaggcaagcgt
atgtccgtgttgaacaaatttaaaaatggccgcgtagaagtgttagttgcaacagatgta
gcagcacgtggtcttgatatttctggcgtaacgcacgtatataactttgatattccgcag
gatccggaaagctatgtccaccgtattggacgtactggccgtgctggtaaaggcggacaa
gctgtctccttcatcacgcctagagaagttccgcatctgcacttgattgaaaagacaact
aagagcaagattgcgcgtaaaactgcacctacaaatgatgaagcagcacaaggtcagcag
cagattgctattgaaaaaatgatgcgtacgattgaaagcaaagatttgcaagcttacaac
gacaaagcagacgagctgattaatcagtttgatgcacaaacagttgttgcagctgcattg
aaaatgctgacaaaagaacgtcgtaatgcaccggtacgcattacttctatcgctccaatc
agtgttaaaggcaacttcaaggataagaaaaaatatcgtggcggcggttcccgcggcggc
gaccgacgcaattctggcggcggacgcagtaacggcggcggtaaatcacgcagccgtaat
taccaaggacaaggcaaacgctctagtggcggctaccgtggtaaacgtaataacgaaaat
agttaa
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