Terribacillus sp. DMT04: KS242_04025
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Entry
KS242_04025 CDS
T07391
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
taid
Terribacillus sp. DMT04
Pathway
taid03420
Nucleotide excision repair
taid03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
taid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KS242_04025 (pcrA)
03430 Mismatch repair
KS242_04025 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taid03400
]
KS242_04025 (pcrA)
Enzymes [BR:
taid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KS242_04025 (pcrA)
DNA repair and recombination proteins [BR:
taid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KS242_04025 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KS242_04025 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
AAA_22
T3SS_CopN_3rd
DEAD
Motif
Other DBs
NCBI-ProteinID:
QXE02403
LinkDB
All DBs
Position
741289..743508
Genome browser
AA seq
739 aa
AA seq
DB search
MSQLANDLINGLNKEQAEAVQHTEGPLLIMAGAGSGKTRVLTNRIAYLLGEKEVSPRSIL
AITFTNKAAREMRERVHKLVGEEGAQIWVSTFHSMCVRILRRDIDRIGYNSNFSILDTSD
QLSVIKQALKRLNLDPKQYDPRAMLGAISSSKNELITPEEYLKEAGSLYEKKVAEVFDLY
QKTLRRNQSLDFDDLIMQTIQLFDRVPEVLQYYQRRFQYIHVDEYQDTNHAQYRLVNQLA
SRYKNLCVVGDSDQSIYRWRGADIANILSFEKDYPNAKVVMLEQNYRSTKTILDAANKVI
GNNTGRKPKNLWTDNMDGSKLRYYEAATERDEALYVTEKIEEMVITEKKKHYRDIAILYR
TNAQSRSIEETFVKAGVPYQMIGGTKFYDRKEIKDMLAYLRLIANPDDDISFERVVNEPK
RGIGKTSIEKLQAYANMHEISLFDTLKEVDFTGVSAKAANALSEFGTMISNWTKQVEFLT
ATDMVQQVLEGSGYEDMLRAEKSIESQSRLENLEEFKTVTKNFEQTSEDKSLIAFLTDLA
LIADIDSMDEDPASDDKVILMTLHGAKGLEFPVVFLIGMEENVFPHSRSQMDETEMEEER
RLAYVGITRAEEELYLTRAKMRTLFGRTNMNAVSRFISEIPSELLEGMQETKQNPFGQSS
RQAAAQKQAPKRVVRKPKPKSGADALGWGLGDKAVHKKWGEGTVVKVNGEGEAMELDIAF
PAPVGIKRLLATFAPITKA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagccaattggcgaatgatttaataaatggtttaaataaagagcaagcagaagctgtg
cagcatacagaaggaccgcttttaattatggcaggtgccggaagcgggaagacccgcgtg
ctgacaaaccgaattgcttatttgcttggagagaaagaagtatcgccgcgcagtatattg
gcgattacattcacaaacaaagcagctcgtgaaatgcgggaacgtgtgcacaaattagtc
ggagaagaaggtgctcaaatttgggtttccactttccactccatgtgtgtgcgcatttta
cgtcgcgatatagacagaataggatacaacagcaacttttctattttagatacaagtgac
cagctgtctgttattaagcaggcactaaaacggcttaatctcgatccaaaacaatatgat
ccgcgtgccatgctaggcgctatcagttcatcaaaaaacgaattgattacaccggaagag
tacctcaaagaagctggtagcttgtatgaaaagaaagtggccgaagtatttgatttgtac
cagaaaacactgcgccgcaaccagtcactcgattttgatgacttgatcatgcaaacaatc
cagctgttcgaccgcgtaccggaagtattgcaatactaccagcgccgtttccaatacatt
catgtggatgagtaccaagataccaaccacgcgcagtatcgcctggtaaatcagctggca
tctcgttataaaaacctttgtgtagtaggagactccgaccaatcgatttatcgctggcgc
ggagctgatattgcgaatatcctctcctttgaaaaggattatccaaatgcaaaggtcgtt
atgctcgaacaaaattaccgctcgacgaagacgattcttgatgcagccaacaaagtaatt
ggcaacaatacaggacgaaagccgaaaaatttgtggacggataacatggatggttctaag
ctgcgttattacgaagcagcgacagagcgagacgaagctttatatgtaacagagaagatt
gaagagatggttattaccgaaaagaaaaaacattatcgcgatattgcaattttgtaccgc
acaaatgcccaatctcgttctattgaggaaacgtttgtaaaagcaggcgttccgtatcaa
atgataggcggcacgaagttctatgaccgcaaagaaatcaaagatatgctcgcttatctt
cgcttaattgccaacccagatgatgacatcagctttgagcgtgtcgttaacgaaccaaaa
cgcggtattggcaaaacttctatcgagaaattgcaagcttatgcaaatatgcatgagata
tctttattcgatacattaaaagaagtcgatttcactggtgtcagtgcaaaagctgccaat
gcattaagtgaattcggaacgatgattagcaactggacgaagcaagttgaatttttaaca
gcgacagatatggtgcagcaagtgctggagggatccggctatgaagacatgctgcgcgcg
gagaaaagcatcgaatcacaaagtcggctggagaacttagaagagttcaagacagtaacg
aaaaactttgagcaaacgagtgaggacaagtcattgattgccttcctgactgaccttgcc
ttaattgcagatattgattcgatggatgaagatccagccagcgacgacaaagtcatctta
atgacattgcatggtgcaaaaggactggagtttccagttgtgtttcttatcggcatggaa
gagaatgtcttcccgcacagccggtcacaaatggacgaaacagagatggaggaagagcgc
cgtcttgcgtatgttggaattacccgcgcagaagaagagctctatctgactcgtgcaaag
atgcggacattgtttggccgaacaaacatgaacgctgtcagccgctttattagtgagatt
ccaagtgaactgctggaagggatgcaggaaaccaaacaaaatccatttggccaaagcagc
agacaagcggcagctcaaaagcaagctcctaagcgtgttgtacgcaagccaaagccaaaa
tcaggtgccgatgctcttggatgggggcttggtgataaggctgttcataagaaatgggga
gaaggaacagtcgtaaaagtgaacggtgaaggagaagcgatggagcttgatattgctttc
ccggcaccagttggaattaagcggctgctcgcgacattcgcaccgattacaaaagcttaa
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