Terribacillus sp. DMT04: KS242_04300
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Entry
KS242_04300 CDS
T07391
Name
(GenBank) rhamnogalacturonan lyase
KO
K18198
rhamnogalacturonan exolyase [EC:
4.2.2.24
]
Organism
taid
Terribacillus sp. DMT04
Brite
KEGG Orthology (KO) [BR:
taid00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
KS242_04300
Enzymes [BR:
taid01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.24 rhamnogalacturonan exolyase
KS242_04300
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
BBS2_Mid
Motif
Other DBs
NCBI-ProteinID:
QXE03342
LinkDB
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Position
complement(800860..802653)
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AA seq
597 aa
AA seq
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MEYLDRGAVAVETEDGIFLSWRFLGNDKKKTSFHIYRDGKKITRKPVKHGTNYLDEAGTA
DSVYRVEAIGKGADQDDIKVWQNNQLHIPLQKPADGKTPDGKSYTYNANDASVGDLDGDG
EWEIILKWDPSNAQDNSRSGYTGNVFIDAYEMDGTHKWRIDLGHNIRAGAHYTQMLVYDF
DGNGKSELVVKTADGTTDAKGKVIGDKNADYRNSSGYILEGPEYLSVFEGNTGKLKETVN
YEPARGNICDWGDCYGNRGDRFLAGVAYLDGKTPSIIEARGYYEKTTIAAYTYKDGKLNK
QWLFNSETDGNEAYAQQGNHNLSIADVDADGKDEIIYGSMALDHDGTGLYSTGLGHGDAM
HVSDLDPSRPGLEVFQVHESSPNKAGIELHDARTGELLWGIPTNRDIGRGLSADIDPRYP
GAEMWAVDGAWNSPTGGLYAASGEKISTNIPPANFAIWWDGDLSREILDHTFDESIQTGT
GLIGKWNPKTEKVDTLLDAEGTYSNNGTKGTPTLQADLIGDWREEAIWRTEDSSALVLYT
TTDMTEQRLPTLMHDPVYRLGVAWQNVAYNQPPHTSYFLGNNMKQPEMPRIEVVKAK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggagtatttggatcgaggcgctgttgctgtcgaaacagaggacggtatctttttaagc
tggcgattcctcggcaacgacaagaaaaagacttcattccatatttaccgtgatgggaag
aaaatcacaagaaaaccagtgaaacatggcacgaactacttagatgaagccggcaccgcg
gacagcgtttaccgagtagaagctatcggaaaaggtgcggaccaagatgacatcaaagtg
tggcagaacaatcagttgcacatcccgcttcaaaaaccagctgatggcaaaacaccagat
gggaagtcctatacgtataatgccaatgatgcaagtgtcggcgatctggatggtgacgga
gaatgggaaattattttgaaatgggatccatctaacgcccaagataactcacgatccggc
tatacaggaaatgtatttattgatgcttatgaaatggatggtactcataaatggcgtatt
gacctcggtcataacattcgtgcaggtgcccattacacacaaatgctcgtctatgatttt
gatggcaacggcaaatcagaattagttgtaaaaacagcagacggcacgacggacgcaaaa
ggaaaagtcattggcgataaaaatgcagattaccgtaacagctccggctatattctcgaa
ggacctgagtatttaagtgtttttgaagggaatacaggtaaactgaaagaaaccgtgaat
tatgaaccagcccgcggcaatatttgcgactggggtgactgttacggaaaccgcggtgat
cgattcttagccggcgttgcgtatttggacggcaaaacaccgagtatcattgaagcccga
ggctattatgaaaaaacaacgattgcagcttacacctataaagatggcaagctaaacaag
caatggctgtttaatagtgagaccgacggtaatgaagcatatgcacaacaagggaatcat
aacttgagcatcgcggatgtcgatgcagatggaaaagatgaaatcatttatggctccatg
gcgcttgaccatgacggtacaggcctttactcgacaggactcggacatggtgatgctatg
catgtgagtgatttagatccaagtcgtcctggcttagaggttttccaagtgcatgagtct
tctcctaataaagccggcattgaattacatgatgcccgtactggcgaactgctgtggggg
attccgacaaacagagacatcggccgcggtctctctgctgatattgacccacgctatcct
ggggctgaaatgtgggccgttgacggtgcgtggaacagtccgacaggcggactatatgca
gcttcaggtgagaaaatctcaactaatattcctccagccaattttgctatatggtgggac
ggcgacctgtctcgggaaatcctagaccacacttttgacgaatctatccaaacaggcaca
ggattgatcggtaagtggaatccgaaaaccgagaaagttgatacattgctggatgctgaa
ggcacgtactctaacaacggcacaaaaggaactcctaccctgcaagcagatttgattggt
gattggcgggaagaagcaatttggcgaacagaagatagcagcgcacttgtgctatacacc
acaactgacatgacggaacaaagactgccaacactgatgcatgaccctgtgtatcgatta
ggcgttgcatggcagaacgttgcctataaccagccgccacacacaagttatttcttggga
aataatatgaaacagcccgaaatgcctcgaatcgaggttgtaaaagctaaataa
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