Terribacillus sp. DMT04: KS242_05780
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Entry
KS242_05780 CDS
T07391
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
taid
Terribacillus sp. DMT04
Brite
KEGG Orthology (KO) [BR:
taid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taid03400
]
KS242_05780 (addA)
Enzymes [BR:
taid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KS242_05780 (addA)
DNA repair and recombination proteins [BR:
taid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KS242_05780 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Viral_helicase1
DEAD
AAA_12
AAA_22
AAA_30
C_Hendra
ResIII
Motif
Other DBs
NCBI-ProteinID:
QXE02693
LinkDB
All DBs
Position
1075962..1079687
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AA seq
1241 aa
AA seq
DB search
MVQWTNEQQLAIDAKGHDILVAAAAGSGKTAVLVERIIQKLVNQDDPVDIDQLLVVTFTN
AAAQEMRSRIGTALEKALEADPSSQHLRKQLSLLQHASISTLHSFCLDVVRKYAYMLDLD
PSFRIADDLEADLIRQEVMGDLLEEWYGKEGEEQAAFFGVVDRFSNDRNDLEVEDLILKL
YDFATQNPYPDTWLDQMAQLYDVAAIEEEEELPWLQVLKREANDQLHAMLQEAEQALALT
REPDGPYHYAETFEAEKQFIAKATELVSGSWNDAVRFIKEQSFGRLPAKKVECDDTKKAQ
AKALRDSYKKRWGKLAGDWFARNLEVYLADMQELYPSIQQLALLVKQFRIRYQSEKRERA
LVDFSDLEHFCLEVLIDENSNPQHIVPSAIAESYQSRFKELLLDEYQDTNLVQETLVTLL
SDRSGSGNIFMVGDVKQSIYRFRHAEPSLFLTKYKAFSDADHPGMRIDLASNFRSRQQVL
DGANYIFRQLFSEDVGEMQYEKEAELIYANTMYDELKQADTDVELLVINRDGSEETDEAD
TDTEMVEDLEKAQLEGRAYARMIQQWIGHEGEGAMQVVDKSTQQQRDLQYRDIVILLRSM
TWAPAIVDELKQQGIPVYAELSTGYLEAIEIKVMMSVLKIIDNPLQDIPFAAVLRSPIIG
LKEDDLAKIRLADQRSSYFEAARSYAKTAKDAISVKIERLLEWLHSWRMEARQGALSALI
WSIMRETGYYDFVGGIPGGRQRQANLRALYDRARNYENTSFRGLFRFVKFIERMEERGDD
LGAAKALGEQEDVVRIMTIHKSKGLEFPVVITGAMDKMFNQQDLRERYLLHKDLGFGSKY
IDPSKRLMYPTLIYHALKAEKQRESLAEEMRVLYVALTRAKEKLVMVGNVASLDKKLQKW
RQVAEHPDWVLPSYYRLEATSYLDWVAPALMRHEQAEELRADELAANLPQEITQDQSKWR
ISLQASKDYVLAEEQAEEANQELLQRISNWQPGEETADWKAEVEDRLTYHYPYAEATRFR
AKQTVTEIKRQREIRDSYSDSRVVNRIQQRAPIASRPRFLQESKELTPAERGSAVHAVLQ
QLDLHKEWSKQKLDEFLLELVEKEFLQQEALAAIDGEKILDFLASPLAERIRQAEQSYRE
TPFTLALPANELYNDWSGAASDKVVVQGVVDQIIVENDGLVLIDYKTDTLFGDDPERRAD
VLMEKYRVQIELYATAIERIWKRPVKEKYLYFFDKGILRQL
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggttcagtggacaaatgaacagcagctggcgattgacgcgaaaggacatgatatttta
gtagcagcggcagcaggttcagggaaaacagctgtactggtagaacgaatcattcaaaag
ctagtgaatcaagacgatccagtcgatatcgatcagctgctcgtcgttacgtttacaaat
gcagctgcacaggagatgcgcagtcgaatcggaactgcgcttgaaaaagccctggaagca
gatccatcttcccagcatcttcgtaaacagctttctttgctgcagcacgcatctatttcc
acgctccattcgttttgtctggacgtagtgcgaaagtatgcgtatatgctagatttggat
ccgagcttccgtattgcagatgacttggaagcagacttgatccgccaagaagtaatgggt
gatttgctggaagaatggtatggcaaagaaggcgaggagcaagctgctttcttcggtgtt
gttgatcgttttagtaatgatcgaaatgatttggaagtagaggacctcattctcaagctg
tatgattttgcgacgcagaatccgtatccagacacatggctggatcaaatggcacaatta
tatgatgtcgcagcaatagaggaagaagaagagcttccatggctgcaagtattaaagcgg
gaagcaaatgatcagctgcatgctatgctgcaggaagcagagcaggcattagcactgacg
cgagaaccagatggaccatatcattatgccgaaacctttgaagccgagaagcaattcatt
gccaaagcgacagaacttgtaagcggcagctggaatgacgccgttcgttttattaaagag
cagtcattcggccggttgccggctaaaaaagtagaatgtgatgatacaaaaaaagcacag
gcgaaggcattgcgcgattcttataaaaaaagatggggcaagcttgccggggactggttt
gcacgaaacctggaagtttacttggctgatatgcaagagctttatccatccattcagcag
ctggctctgcttgttaaacagttccgcatccgctatcaatcggaaaaacgcgagcgggct
ttagtcgatttctcagacttggaacatttttgcttggaagtgctgatagacgaaaatagt
aatccacaacatattgttccctctgctattgccgaaagctatcaaagccgtttcaaggaa
ctgcttttagatgaataccaagatacaaacttggtgcaggagacgctggtcaccttgctt
tccgaccgttcgggaagcgggaatatatttatggttggggatgtcaaacagagtatctat
cgatttcggcatgcggagccatcgttattcttaacgaaatacaaagccttttccgacgca
gatcatcctggtatgcgcattgatctcgccagcaatttccgaagccgccagcaagtactg
gatggagcaaattatatttttcgtcagctgttttcagaggatgtcggggagatgcagtac
gagaaggaagctgagctgatttatgccaatacgatgtacgatgagctcaaacaagcagac
actgacgttgagcttcttgttattaaccgagatggatcggaggaaacagacgaggcggat
actgatacagaaatggtagaggatttggagaaggcgcagctggaagggcgtgcttacgct
cggatgattcagcaatggattggacatgaaggcgaaggggcgatgcaagtcgtcgataaa
agcacgcagcaacagcgtgatcttcagtatcgcgatattgtcattctgctgcgctctatg
acgtgggcgccagctattgttgatgaattgaagcagcaaggtattccggtatacgcggag
ctttcgactggttacttggaagcaattgaaatcaaagtaatgatgagcgtgctgaaaata
atcgataatccactgcaagatatcccattcgcagctgttctgcgctcgccaatcattggg
ctgaaggaagacgatcttgccaagattcgcttagctgatcagcgaagcagttattttgaa
gcagcaagatcttatgcgaaaacagcaaaggatgctatttctgtaaaaattgaacgattg
ctggaatggctgcacagctggaggatggaagctaggcaaggtgcattatctgccctcatt
tggtcgattatgcgagaaacaggttattatgactttgtcggaggtattccaggcggccgc
cagcgtcaagcgaatttacgtgcgctgtatgaccgggcgcgcaattatgagaacacatcc
ttccgggggctgttccgctttgtaaagtttattgaacgaatggaagaacgcggagatgat
ttgggagctgccaaagctttaggtgagcaggaagatgtcgtccgcattatgactattcat
aaaagtaaaggacttgaattcccagtcgttattaccggcgctatggataagatgttcaat
cagcaagatcttcgggagcgctatttgctgcataaagacttgggttttggcagtaaatat
atcgacccttcgaaacggcttatgtatcctacgttgatttaccatgcgttaaaagcggag
aagcagcgtgaatcattagccgaagaaatgcgggtactatatgtagcgttgacacgagcg
aaggaaaagcttgtcatggtcggtaacgtggcttctttagacaaaaagctgcaaaaatgg
cggcaggtagccgaacaccctgactgggtgctgccatcttattaccgtttagaagcgaca
tcttatctggattgggtagcacctgcattgatgcggcatgagcaggcagaagaacttcgt
gccgatgagctcgctgcaaatctgccgcaagaaatcacacaggaccaatccaagtggcga
atcagcttgcaagctagcaaagattacgtgctggcagaggagcaagcagaagaagcaaac
caggagctgctccagcgtattagcaactggcagcctggtgaagaaactgcagactggaaa
gcggaagtagaggaccggctgacgtatcattatccgtacgcggaagctacgagatttcgt
gccaaacagacagtaacagaaattaaacggcagcgggaaattcgggatagctatagcgat
agtcgagtcgtaaatcggattcagcaaagagctccaattgccagcagaccgcgttttctg
caggaatcgaaggaacttacgccagcagaacgaggcagcgctgttcatgcggtattgcag
cagctggatctccataaagagtggagtaaacaaaaactagatgaattccttctagaatta
gtagaaaaagagtttctgcagcaagaagcattagcggcaattgatggagagaagatactt
gatttcctagcttcccctcttgcggagcgtatccgtcaggccgaacaatcttatcgggaa
acgccatttacattagcgctgcctgcgaatgaactgtataacgattggtcgggagctgct
tctgataaggtagtcgtccaaggagtcgtagaccaaattattgtagaaaatgatggttta
gtactgatcgactacaaaacagacacgttatttggagacgatccagaaagacgagcagat
gttctgatggagaaataccgtgtacagattgaactatatgccactgccattgagcggata
tggaaaaggcccgtcaaagaaaagtatctttactttttcgacaaagggattttacggcaa
ttataa
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