Terribacillus sp. DMT04: KS242_08210
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Entry
KS242_08210 CDS
T07391
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
taid
Terribacillus sp. DMT04
Brite
KEGG Orthology (KO) [BR:
taid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
taid03016
]
KS242_08210 (truB)
Enzymes [BR:
taid01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KS242_08210 (truB)
Transfer RNA biogenesis [BR:
taid03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KS242_08210 (truB)
Prokaryotic type
KS242_08210 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QXE03138
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Position
1535288..1536208
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AA seq
306 aa
AA seq
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MDGILPLWKPKGMTSHDCVFKARKLLQTKKIGHTGTLDPDVEGVLPLCIGQATKVVPYLT
DTSKTYVAEVTLGTSTETEDKSGEVIEEKQITEPIPIAAIEKVLQSFLGETEQIPPMYSA
VKVGGRKLYEYARQGQVVERPIRRITIHSIDLHKDSVRADGSVFGFTVSCSKGTYIRTLC
VDIGKALGYPAHMSSLVRTQAGAFSAQDTVTFAKIEEAMEAGTIEQLLQPVTKAVDYLPL
IEADADIEQKVRFGQRLPRPAEADLYRVQRGEQLLGIYETHPSYSQLLKPKRVFVSGKAG
GTDAND
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttggatggaatcctgccgttatggaaaccgaaagggatgacctcccatgactgtgtgttt
aaagcacgcaagctattacaaacgaagaaaattgggcataccggcacacttgatccggat
gtagaaggtgtcttgccgctctgtatcggacaagcaacaaaggttgttccgtatttgacg
gatacctccaaaacatatgttgcagaagtaacactcggtacctcgaccgaaacggaagac
aaaagcggagaggtaatcgaagaaaaacaaatcacagagccaattcctatagccgctatt
gaaaaagtactccaaagcttccttggtgaaacagaacagataccgcctatgtattctgcc
gtcaaagtaggaggccgcaagttgtatgaatacgccagacaggggcaagtcgtggagcgt
cctattaggcggattacaattcacagcatagacttgcacaaagattccgttcgcgcggat
ggaagcgtgttcgggttcacagtaagctgctcaaaaggtacttatattcgtacgctttgt
gtggatataggcaaggctctcggatacccggcgcatatgagcagtttggtgcgtacgcaa
gctggagcattttctgcgcaagatacagtaacgtttgctaaaatagaggaagcaatggaa
gcaggaacgatagaacagttgctgcagcctgtcacgaaagcagttgactatctgccgctc
attgaagcagatgccgatatcgaacaaaaggtccggttcggtcagcgtcttccgcggccg
gcagaagcggatctttaccgtgttcaaagaggagaacaattgcttggcatttatgagacg
catccttcatattcacagctattaaagccaaaacgagtattcgtatcagggaaagcaggt
ggcacagatgcaaacgattaa
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