Terribacillus sp. DMT04: KS242_10435
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Entry
KS242_10435 CDS
T07391
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
taid
Terribacillus sp. DMT04
Brite
KEGG Orthology (KO) [BR:
taid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taid03019
]
KS242_10435
03009 Ribosome biogenesis [BR:
taid03009
]
KS242_10435
Enzymes [BR:
taid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KS242_10435
Messenger RNA biogenesis [BR:
taid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KS242_10435
Ribosome biogenesis [BR:
taid03009
]
Prokaryotic type
rRNA helicases
KS242_10435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SMC_N
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QXE00446
LinkDB
All DBs
Position
complement(1961265..1962581)
Genome browser
AA seq
438 aa
AA seq
DB search
MKNHHFKQYALQPVINEAIDKLGFTKPTAIQEKVIPAVLRGESVIGQSHTGSGKTHSYLI
PLFSKLKEEDQNAQFVVTAPTRELAIQIYEEARHFIKLAGKENDWHTKLFIGGTDKKRSI
EKLKTQPQIIIGTPGRILDLMEEQALDLYPATSFVVDEADLMLDLGFIKEVDQILARMNQ
DVQLLVFSATIPERLQPFLKKYLDNPKHFEIGGHLSPETMEHRLIPMRHRDEAELIMKIA
DVIQPYMAIIFVNGKDAANRLAAELTDKGLEVGLLHGGLTPRERKRVLRDIQELRFQYLV
ATDLAARGIDIKGVSHVINAQLPKEEPFYVHRVGRTARAGLEGTAINLYHDYDLELIQKL
DKKGLEFTNYDISNGEWKELKPWNERVTRKKTESDNENQAWKQVRKPKKVKPGYKRKMKY
EKDKIKKKLDRKDRFKRK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcatcattttaaacaatacgcgcttcagccagtcatcaatgaagcgattgat
aaactaggctttaccaaaccaactgcaattcaagagaaagtcattcctgcagttttgcgt
ggagaaagtgttattggtcagtcacatactggatcgggtaaaacacattcttatttgatt
cctctgttcagcaaactgaaagaagaggatcagaacgctcaatttgtagtgacagcacca
acgcgcgagttagctattcaaatttatgaagaagctcgtcattttattaaacttgctgga
aaagagaacgattggcatacaaagctatttatcggcggtacagataaaaaacggtcaatt
gagaaactgaaaacacagccccaaattattatcggtacaccaggacgtattttggattta
atggaagagcaggcacttgatttgtatcctgctaccagttttgttgtcgatgaagcagac
ttaatgctggatcttggtttcatcaaagaagtggatcaaattttagcgcgaatgaatcaa
gatgttcagcttcttgtgttctcagcaacaattccagagcgtctgcagccatttttgaaa
aagtatctggataatccgaagcactttgaaattggcggtcacctttcaccggaaacaatg
gagcaccgcttaattccgatgcgtcaccgtgacgaagccgaattgattatgaaaatagca
gatgtaattcagccgtatatggcaatcatttttgtaaatggaaaagatgcagccaatcga
ttagctgctgaattaacggataaaggactggaagtcggtctattgcatggcggtctgacg
ccgcgtgaacgaaaacgggtgcttcgcgacattcaagaacttcgtttccaataccttgtt
gcgacagacttggcagcacgcggtatcgatattaaaggtgtcagccatgttatcaatgcg
cagcttccaaaagaggagccattctatgtgcaccgtgttggcagaacggcacgagctggt
ttggaaggaacagcgattaacctttatcatgattatgatttggagcttatccagaaactt
gataaaaaaggccttgaattcacaaactatgatatcagcaatggcgaatggaaagaatta
aagccatggaacgagcgggttacacgtaagaaaacggaatccgacaacgaaaaccaagca
tggaaacaagttcgtaaaccgaaaaaggtaaaaccaggctataaacgaaaaatgaaatat
gaaaaagataaaatcaagaaaaagttagaccgtaaagaccgttttaagcggaagtaa
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