Terribacillus sp. DMT04: KS242_11700
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Entry
KS242_11700 CDS
T07391
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
taid
Terribacillus sp. DMT04
Pathway
taid03030
DNA replication
taid03410
Base excision repair
taid03420
Nucleotide excision repair
taid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KS242_11700 (polA)
03410 Base excision repair
KS242_11700 (polA)
03420 Nucleotide excision repair
KS242_11700 (polA)
03440 Homologous recombination
KS242_11700 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taid03032
]
KS242_11700 (polA)
03400 DNA repair and recombination proteins [BR:
taid03400
]
KS242_11700 (polA)
Enzymes [BR:
taid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KS242_11700 (polA)
DNA replication proteins [BR:
taid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KS242_11700 (polA)
DNA repair and recombination proteins [BR:
taid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KS242_11700 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KS242_11700 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Enkurin
HHH_2
HHH_5
Phage_cap_E
Motif
Other DBs
NCBI-ProteinID:
QXE00678
LinkDB
All DBs
Position
complement(2194805..2197438)
Genome browser
AA seq
877 aa
AA seq
DB search
MTKKLVLIDGNSIAYRAFFALPLLNNDKGIHTNAIYGFTTMLLRILENENPTHMLVAFDA
GKTTFRHETFKEYKGGRQKTPPELSEQFPLLRELLDAFSIKHYQLSQYEADDIIGTLAKQ
AEQDEFEVKVISGDKDLLQLVSDKTTIQLTRKGISETDSYTPNFLLENMEVTADQIVDMK
ALMGDSSDNIPGVPGVGQKTAVKLLKQFQTLDHIYEQLDEVSGKSIKQKLADNKDSAYMS
RELATIDTKAPIEVSLADINYDGYQTPALSTIFKDLGFQSLLTRIGEEGETEEVSQELAP
LGVIIVDDIKSELFTGEDALVVEMLTDNYHTAQVEGFGLANANGAYFIPSEVAYNSDVFK
EWAQDSSKAKWVFDVKRTVVALLHHGITLENANFDLLLASYLINASENHHDIPAIGHRFG
MKDVLYDEEVYGKGAKMKVPEVDALAEHLARKAMVIYNLKPEAEAKLSENEQLELLQSLE
LPLAAILGEMEYLGVQVDVEKIQEMKEQLGGRLTEIEQKVYELAGEEFNLNSPKQLGPIL
FEKLGLPVIKKTKTGYSTSADVLEQLADQHEIIEQLLLYRQLGKLQSTYIEGLLKVVDKD
NKIHTRFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSKDNYVIFAADYSQIEL
RVLAHIAQDDKLIEAFNEDMDIHSRTAMDVFHVEEKDLTSNMRRQAKAVNFGIVYGISDY
GLSQSLGITRKEAQQFIDRYFKSFPGVKTYMEDIVQDAKQKGFVTTIMNRRRYLPDLTSR
NFNVRSFAERTAMNTPIQGSAADIIKKAMIDLAERLESEQMEAKLLLSVHDELILEAPES
EIEKLKEVVPDVMEHTVKLDVPLKVDYSYGKTWYDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaaattggtcttaattgatgggaacagcatcgcatatcgtgcattttttgca
ctgccgctgttaaataatgataaaggtattcacacaaatgctatctacggtttcacaaca
atgctgcttcgtattctggaaaacgaaaacccaacgcatatgcttgttgcttttgatgcg
ggcaagacgacattccgacatgaaacgtttaaggaatacaaaggcggccgacaaaaaact
ccaccggaattatcagagcagttcccgctgcttcgtgaattgctggacgctttttcgatt
aaacattatcagctcagtcaatatgaagcggatgatattatcggtacattagcaaaacaa
gcagagcaggatgaatttgaagtgaaagtcatttccggagataaggatcttctgcagctt
gttagtgataagacgacaattcagctgacaagaaaagggatcagcgaaacagattcctac
acgccgaatttcttgctggagaatatggaagtcacagcagatcagattgttgatatgaaa
gcgttaatgggcgatagttccgataacattcctggtgttccaggtgtcggacagaagact
gctgtgaagcttctaaagcaattccaaacgcttgatcacatttacgagcaactggatgaa
gtatcaggaaaaagcatcaaacagaagcttgctgataataaagactctgcttatatgagc
cgagagcttgctaccattgatacaaaagcgccaatagaagtaagtcttgctgatattaat
tatgatggctaccagacgccagctttaagtacaatctttaaagatcttggtttccagtcc
ttgctaactcggattggagaagaaggagaaacagaagaagtttcacaagagcttgcgccg
ctgggtgtaatcattgttgatgacataaagagcgagctgttcactggtgaagacgcccta
gtcgttgagatgctgacagacaattatcatacagcgcaggtagaaggatttggtcttgcc
aatgcgaatggtgcctactttatcccatctgaagtcgcatacaattcggacgtattcaag
gaatgggcacaagacagctcaaaagcgaaatgggtatttgatgtgaaacgaacagtcgta
gcgctgctgcatcacggtattacattggaaaatgctaatttcgacttgctattagcatcc
tacttaatcaatgcgtcggaaaaccatcacgatatcccagcgattgggcatcgtttcgga
atgaaagatgttttgtatgacgaagaagtgtacggaaaaggcgcgaagatgaaggttccg
gaagtagatgcacttgccgaacatttagctagaaaagcaatggtgatttataacttgaag
ccagaagcagaggcaaagctttccgagaacgaacagctggagctgctccagagtttagaa
ctgccgcttgctgctattctaggtgaaatggagtaccttggcgtgcaggttgatgttgaa
aaaattcaggaaatgaaagaacaactgggcggcagattaactgaaattgaacaaaaggta
tatgaattggctggcgaagagttcaatcttaattcaccaaaacagctcggtccgattctg
tttgagaagctgggcttaccggttattaagaaaaccaaaacaggttattctacttctgca
gatgtattggaacagctggcagaccagcatgagattattgagcagcttctcttgtaccgc
caattaggcaagctgcagtccacctatattgaaggtttgctgaaagtggtggacaaagac
aataaaattcatacgcgtttcaaccaggcactaacccaaacaggtcgtttaagttcaaca
gaacccaatctgcaaaacattccaattcgactggaagagggtcgtaaaatcagacaagca
ttcgttccttcgaaagacaattatgttatttttgcggctgactattcccaaatcgagctg
cgtgtactagcgcatattgcccaagatgacaagctgattgaagcgttcaatgaagatatg
gatattcacagccgaacagcaatggatgtatttcatgtagaagaaaaagaccttaccagt
aatatgcgacgccaagcaaaagctgttaactttggtattgtttatggaatcagtgattat
ggactgtctcaaagtctcgggattacaaggaaggaagcacagcagttcatcgatcgttat
ttcaagagcttcccaggtgtaaaaacatatatggaagacattgttcaggacgcgaagcaa
aaaggctttgtaacaacgattatgaatcgcagacgttacctgccggatttgactagccgt
aacttcaatgtgcgcagttttgctgaacgtactgcgatgaatacacctatccaaggcagt
gccgcagatattattaaaaaagcgatgattgacttagcagaacgtttggaatcagaacaa
atggaagcgaagctgctgctttctgtacacgatgaattgattcttgaagcgcctgaatca
gagattgagaagctgaaagaagtcgttccggatgtgatggaacatacagtgaagctcgat
gtgccgctaaaagtggattattcatacggcaagacatggtatgatgcgaaataa
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