Terribacillus sp. DMT04: KS242_11770
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Entry
KS242_11770 CDS
T07391
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
taid
Terribacillus sp. DMT04
Pathway
taid03030
DNA replication
taid03430
Mismatch repair
taid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KS242_11770 (dnaE)
03430 Mismatch repair
KS242_11770 (dnaE)
03440 Homologous recombination
KS242_11770 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taid03032
]
KS242_11770 (dnaE)
03400 DNA repair and recombination proteins [BR:
taid03400
]
KS242_11770 (dnaE)
Enzymes [BR:
taid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KS242_11770 (dnaE)
DNA replication proteins [BR:
taid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KS242_11770 (dnaE)
DNA repair and recombination proteins [BR:
taid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KS242_11770 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HROB
HSP33
Motif
Other DBs
NCBI-ProteinID:
QXE00692
LinkDB
All DBs
Position
complement(2211883..2215155)
Genome browser
AA seq
1090 aa
AA seq
DB search
MDFTHLQIRSSYSFYQSTIKIPQLVSKAKEAGFETLALADDGVMHGAVPFYLACLDADIK
PIIGVHVPVEAEEQVMKVLLLAENDSGYQRLVEISTFLQSGSAERLTLSDLDKYAQGVIA
IVPSHTLIQMDIMPWRAIYGERLYAGISPDEVRFLDEQTLINWQQQTDVRFTATGDVRYL
EEEDRDAYECLLAMQEGATWQPTPFDSPSLYHLRTQSEMMELSQSETWQQALTQAGAIAE
RCTVQLEIGKRRLPAYPVPEGETADAYLRSICEQQLTEIYHNRQDAQDRIAYELGVIKEM
GFSDYFLIVWDFVRYAKEQGIRVGPGRGSAAGSLVAYVLGITAVDPLAYELLFERFLNPE
RITMPDIDIDFSDYRRDEVIRYVQNKYGADRVAQIITFGTFAARSLLRELIKTMEIPQAD
ATFLLKAIPTNAPTLSKGLRASEELTAYVKESEQLKRLFRIGVKLEGLPRHASTHAAGVV
ISADPLVNTVPLTEGHDEVALTQFAMKELEQLGILKMDFLGLRNLTLMDQVLSSVARQAP
SLDLDRIPLDDEITFQLFRDGRTNGVFQFESSGMKQVLRQLKPTSFEDIVAVNALYRPGP
MSYIPVFVKRKHGEETISYPHENLAPILEKTYGVLVYQEQIMQIAASMAGYKMGEADMLR
RAVSKKDAKVLEREESRFLSGCIENGYTADTAKEVFSWIVKFANYGFNRSHAVAYSYLAY
QLAYLKAHYPASFFAELMSGVANQPDKIRQYMREASGSGIDILPPSINKSFGKYTVEYTN
IRMGMLTIKGIGAQVVREIISARKEGTFKNLFDFCIRVTISKTALEQLILAGAFDSIHSN
RASLLATIDKAMEQAELFKELYEQPSLLGEVEFEASYDEQEPFSPMAILKYEKEVLGLYI
SSHPLASYRSTLRSSGYITVQQLESMPPKKQVRLTAVLLQQRVIRTKKGQPMAFLTLGDE
TGEMEAVVFPDLHRQIGRFLEEEALLDLVGKLEERNGEKQLILQEGRPFHEDQLQQSKQR
LFIRYDDEDQVLEVLRKYTKTYPGNVPVIVVQKETRKSYQLAETYSLELSAACLAELRKQ
FGKENVAVSK
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggatttcacacatctgcaaatcagaagcagctacagtttttatcaaagtacaatcaaa
attccacagttagtaagtaaagctaaagaagcaggttttgaaacgttggcattggcggat
gatggggtaatgcatggcgcagtgccattttaccttgcttgcctggatgctgatataaag
ccaattatcggagtgcatgtcccagttgaagcagaagaacaagttatgaaagttctctta
ttggcggaaaatgattcagggtatcaaagacttgttgaaataagcacctttctgcagtcc
ggcagcgccgaacggctgacactgtctgatctggataagtatgcacaaggagtcattgcg
attgtcccttctcatacgctgattcaaatggatatcatgccttggcgagcgatttatggg
gagcggctttacgctggcattagtcctgatgaagtacgctttctggacgagcagacactc
atcaactggcagcagcagacggatgtacgctttacagcaaccggagatgttcgctattta
gaggaagaagatagggatgcttatgaatgcttacttgcaatgcaggaaggagccacatgg
cagccaacaccgtttgattctccatcactgtaccacttacgaacccaatccgaaatgatg
gagctttctcaaagtgaaacgtggcagcaagcattaactcaagccggagccattgcagag
cgctgtaccgtgcagcttgaaataggcaaacgacgcttgccggcttatcctgtaccagaa
ggagagacggctgatgcttatttaagaagtatatgcgagcagcaactaacggagatatat
cacaatcgtcaagatgcacaagacaggattgcttatgagctgggcgtcattaaagagatg
ggctttagtgattatttccttattgtttgggattttgtacgctatgcaaaggaacaaggc
atccgagtcggtcctggtcgggggtcggctgcaggatctctcgtcgcttatgtgcttggc
attacagctgttgatccgctggcttacgaattattattcgagcgttttcttaatcctgaa
agaatcacaatgcctgatattgatattgatttctctgactatcggcgagatgaagttatt
cgttacgtacaaaacaaatatggagcagatcgggtagcgcaaattattacattcggcacg
ttcgccgctcgttcgttgctgcgtgaattaattaaaacaatggaaataccgcaagcagat
gcaacgtttctgttaaaagcaattccaactaatgcgcctactttatcgaaaggactgcga
gcgtctgaggagctaaccgcttatgtgaaagaatcggagcagctgaaacgcttattccgg
attggagtgaagttggaagggctgccgcgtcatgcgtcaacgcatgcggctggcgtggta
attagtgctgatccgctcgtaaacacagttccgcttaccgaagggcatgatgaagtagcg
ctaacgcaatttgccatgaaagaactggagcagctggggatcttaaaaatggatttccta
gggctgcgcaaccttacattaatggatcaagtgctgtccagtgtggccagacaagctcct
tcactcgatttagaccgtatcccgcttgatgatgagataacgtttcagttattccgcgat
ggccgaacgaatggtgtgttccagtttgaatcaagcggtatgaagcaagtacttcggcag
ctgaagcctacttcatttgaagatattgttgccgtcaacgcgttgtatcgtccaggcccg
atgagttacattcctgtctttgttaagcggaagcatggagaagaaacaatcagctatccg
cacgaaaatctagctccaatcctggaaaaaacgtacggagtacttgtgtatcaggagcag
attatgcagattgctgcttcgatggctggctataaaatgggagaggcagatatgctgcgc
cgagctgtcagtaagaaggatgccaaggtgctggaacgagaggaatcccgcttcttgtct
ggctgtatagaaaatggttacacagccgatactgccaaggaagtattttcctggatcgtt
aaattcgccaactacggttttaaccgcagtcatgcagttgcatacagctatctagcgtat
cagcttgcttatttaaaagcgcattacccagccagcttctttgctgaattaatgagcggt
gttgcgaatcagccggataaaatccgccagtatatgcgggaagcaagcggaagcggaatt
gatattttacctccttccataaataagagctttggtaaatacactgtcgagtatacgaac
attcgaatggggatgctgacaataaagggcatcggtgctcaggttgtccgtgaaattatc
tcggcccggaaagaaggaacatttaaaaatctgttcgacttctgtatccgcgtcacaatt
agcaaaaccgccttagagcagcttattctggcgggtgcctttgattctatacacagcaat
cgagcatctttattagctaccattgacaaagcaatggaacaagctgaattattcaaggaa
ctttacgaacagccttccttgctcggagaagtagaatttgaagcgtcgtacgatgagcaa
gaaccattttcaccgatggcaattttaaagtacgaaaaagaagtgctcggactgtatatt
tccagtcatccgctcgcaagctatcgaagtaccctgcgcagcagtggctatataacggta
caacagctcgaaagcatgccgccaaaaaagcaggtgcgactaaccgctgttttacttcag
cagcgcgtcatccgcacgaaaaaaggacagccaatggcgttcttaacgttaggtgatgaa
acaggcgaaatggaagcggtagtttttcccgatttgcatcggcaaattggccgattctta
gaagaagaagcattgctggatttagttggaaaattggaagaaagaaatggagaaaagcag
ctcattctgcaagaaggacgaccattccatgaggaccagcttcagcaaagtaagcagcga
ttatttattcgttatgatgatgaagaccaagtgcttgaagtgcttcggaaatatacgaaa
acataccctggcaacgtacctgtcattgttgtgcaaaaagaaacgcgcaagagctatcag
ctggcagagacatactctcttgaattaagtgcagcatgcttggcagagctaaggaaacag
tttggcaaggagaacgtggcagtatccaaataa
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