Terribacillus sp. DMT04: KS242_12035
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Entry
KS242_12035 CDS
T07391
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
taid
Terribacillus sp. DMT04
Brite
KEGG Orthology (KO) [BR:
taid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
taid03016
]
KS242_12035 (thpR)
Enzymes [BR:
taid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KS242_12035 (thpR)
Transfer RNA biogenesis [BR:
taid03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KS242_12035 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Acb1
Phage_tail_terminator_9
Motif
Other DBs
NCBI-ProteinID:
QXE00742
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All DBs
Position
complement(2272125..2272676)
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AA seq
183 aa
AA seq
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MSTHYFIGIGLGTSIQAALADWQDELKAYVPMKQWPRPEEFHITLQFLGATSDQQLDQLT
EAWQTQQFGKAFALDAAGVDVFGSPKQPRVVWAGVKPHDPLQQLYQHVITATAKAGFEQE
NRPYRPHITLGKRWGSGNVEGPLPLPEKQLAKTILVDKVTLYRIEPGKRPKYVPVLVKDL
EKE
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacacattatttcatcggaattggattaggcacctcgattcaagcagcgctcgct
gactggcaggacgaattgaaagcttatgtgccgatgaaacaatggccaagaccagaggaa
tttcatataacattgcagtttcttggtgctacgtcagaccagcagctggatcaattgact
gaagcatggcaaacgcagcagttcggaaaggcatttgcattggatgcagctggtgttgat
gtatttggcagtccaaaacagccccgtgttgtctgggcaggtgtaaaaccgcatgatccg
ctgcagcagctgtaccaacatgtaataactgcaacagcaaaagctggattcgaacaagaa
aaccggccctaccgccctcatattacgctcggtaaaagatggggatcaggcaacgtggag
gggccgctgccgctgccggaaaaacagcttgctaaaacgattttagtagataaagtgacg
ctatatcgaattgaaccaggtaaacgtccaaagtacgttcctgtactggtgaaagatttg
gaaaaggagtga
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