Terribacillus sp. DMT04: KS242_14420
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Entry
KS242_14420 CDS
T07391
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
taid
Terribacillus sp. DMT04
Pathway
taid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KS242_14420 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taid03021
]
KS242_14420 (rho)
03019 Messenger RNA biogenesis [BR:
taid03019
]
KS242_14420 (rho)
Transcription machinery [BR:
taid03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KS242_14420 (rho)
Messenger RNA biogenesis [BR:
taid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KS242_14420 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA
ATPase_2
AAA_22
AAA_25
Mor
NACHT
Motif
Other DBs
NCBI-ProteinID:
QXE01170
LinkDB
All DBs
Position
complement(2765808..2767094)
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AA seq
428 aa
AA seq
DB search
MAELSISHLETLTLKDLYAMAREYRVSYYAKLTKRELIFAILKAQAEKDGFLFMDGILEI
IPSEGFGFLRPINYAPSAEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVDA
VNNEDPEVAKERVHFPALTALYPDKHMNLETEARKVSTRIIDLMTPVGFGQRGLIVAPPK
AGKTMLLKQIANSITTNHPDAKLIILLVDERPEEVTDIERSVHPDVDVVSSTFDEVPENH
IKVSELVLERAMRLVEHKKDVIVLMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKR
FFGAARNIEEGGSFTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAID
MVRSGTRKEELLVSKGQLDKMWAIRKTMQDSHDFADRFLRRLKQSKNNEEFLANMEEDMK
RKGTNKRA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaactatcgatttctcatctagaaacattaacattaaaagatttatacgcgatg
gctcgcgaataccgtgtttcctattatgcaaagttaacgaaacgtgaactgatttttgcg
attttaaaagcgcaagcagagaaagacggattcctcttcatggatggtattttagaaatc
atcccttccgaaggtttcggattcttaagaccgattaattatgcgccaagtgcagaagat
atttatattagtgcgtcgcaaatccgccgttttgatttacgtaacggagacaaggtttct
ggtaaagttcgtccgccaaaagaaaacgaacgttattatggtctgcttcatgttgatgca
gtaaacaatgaagatccggaagtagcgaaggaacgtgtgcattttccagcactgacggct
ttatatccggataagcatatgaacctggaaacggaagcacgtaaagtctccacgcggatt
attgatttgatgacgccggtaggttttgggcagcgtggtttgattgttgcgccgccaaaa
gcagggaaaacgatgcttttgaaacagattgccaacagcattacaacgaatcatccagat
gctaaattaatcatcttgcttgtagatgagcgcccggaggaagtaacagatattgaacgt
tccgtacacccggatgttgatgtagttagctctacttttgacgaagtaccggaaaatcat
atcaaagtatcagagcttgtacttgaacgcgcgatgcgtcttgtggagcataagaaagac
gttattgtacttatggacagtattacacgattagcacgtgcttataacttagtaattccg
ccaagcggacgtacgctgtccggcggtattgaccctgctgcattccaccgtccgaaacga
ttcttcggagcggctcgtaacattgaagaaggcggaagctttactatcttggcgacagca
cttgttgatacaggctcacgtatggatgatgttatctatgaggagtttaaaggtacaggg
aatatggagctgcatctggaccgttctctggcagagcgacgtatcttcccggcaatcgac
atggtacgctctggtacgagaaaagaggagctgctcgtgtcaaaaggacagcttgataag
atgtgggcgattcgcaaaacgatgcaggattcgcatgactttgcagaccgcttcttgcgc
cgtctgaagcaatcgaaaaataacgaggaatttctcgcaaatatggaagaagatatgaag
cgaaaaggcacgaacaagcgcgcctga
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