Pseudotamlana carrageenivorans: C1A40_02735
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Entry
C1A40_02735 CDS
T05295
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
taj
Pseudotamlana carrageenivorans
Pathway
taj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1A40_02735 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taj03019
]
C1A40_02735 (recQ)
03400 DNA repair and recombination proteins [BR:
taj03400
]
C1A40_02735 (recQ)
Enzymes [BR:
taj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1A40_02735 (recQ)
Messenger RNA biogenesis [BR:
taj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C1A40_02735 (recQ)
DNA repair and recombination proteins [BR:
taj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C1A40_02735 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_11
GerE
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AUS04453
UniProt:
A0A2I7SEW9
LinkDB
All DBs
Position
complement(606779..608914)
Genome browser
AA seq
711 aa
AA seq
DB search
MHTTETKDKLFSNLKTYFGYDTFRAQQKAIIETVLSKKDCLVIMPTGGGKSMCFQLPALS
FEGVTLVISPLIALMKDQVDGLNANGISASYFNSSQSASEQDLIIERVIQADLKLLYVAP
ESLASLQNIINEKYISCVAIDEAHCISSWGHDFRPSYQQLGFLKGTLPNTPFIALTATAD
KATRTDIAKQLRIEHAQQFISSFDRENIELEVRPADNRISQIVKFINKTPNQSGIVYCLS
RKTTEQLAKKLKTNGISAKAYHAGLNFEERSKVQESFIYDKTQVVCATVAFGMGIDKSNV
RWVVHYNMPKNIEGYYQEIGRAGRDGLKSHALLFHSYADVIQLRNFASGASNEAFQIAKL
DRMKQFSEATTCRRKILLSYFGELLAENCGNCDVCKNPPQFFDGTIFAQKILSAVYRLKQ
AEPIGTVIDVLRGSQNATVLDKGYNQLKTFGIGREIAYRDWQHLIIQLINQGFCEIAFHK
NNVLRLTEFSNKVLFEGAKVSLTKPVHIPEPKVKERVKRKPKSTSKTRVKTVENSLFERL
RQLRYKIALEEDIPAYLVFSDATLKEIERERPLSESDFLSISGVGQRKLEVYGDEFMAEI
LDFMGSKVNKPKKKATHLVTYELYKSGLSVEEISMERKLSTTTIYSHIAKLHSSGKAVNI
HDFVSKTEIEAVRKAKQELDAPSALRPYYDYFNADLDYFKIRLALSVVDKN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcacactacagaaactaaggataaattgttttctaatttaaaaacgtacttcggatac
gatacgtttcgggcacagcaaaaagcgattattgaaacggttttaagcaaaaaagattgc
ttggttatcatgcctactggtggcggaaaatcgatgtgtttccaattaccagccctaagt
tttgaaggtgttaccctagtcatttcgccattaattgctttgatgaaagatcaagtagat
ggtttaaatgccaatggtatttcggcttcgtattttaatagcagtcagagtgcttccgaa
caagatcttattatagaacgtgttattcaagccgacttaaaactactgtatgtggctcca
gagagcctcgcgtcgcttcaaaatatcattaatgaaaaatatatcagttgtgtcgctatt
gatgaggcgcactgtatttcatcttggggacacgattttcgaccatcatatcagcaacta
ggatttttaaaaggtaccctgcctaatacaccatttatagccttaacggccactgccgat
aaagccacacgaaccgacatcgcgaagcaattacgtattgaacatgcgcaacaatttatt
tcgtctttcgatcgagaaaatattgaacttgaagtccgccctgccgataatagaatatct
caaatcgtaaagtttataaacaaaacgcctaatcaatcgggtattgtttattgtttaagc
cgaaaaaccaccgagcaattggctaaaaagcttaaaactaatgggatttcggcgaaagcc
tatcatgcgggtttgaattttgaggaaaggtctaaagtacaagagtcatttatttatgat
aaaacccaagtcgtttgtgctacggttgcttttggtatgggtatcgacaaatctaatgta
cgttgggtcgtgcattataatatgcctaaaaatatagaaggctattatcaggaaattggt
cgtgctggacgggatggattaaaatcacacgctttgctatttcatagttatgctgatgta
attcaacttcggaattttgccagtggtgcatcaaatgaagcgtttcaaattgcgaagctc
gaccgtatgaagcagtttagtgaagcaaccacttgtcgtagaaaaattttgcttagctac
tttggagaattgcttgccgaaaattgtggaaactgcgatgtttgtaaaaacccgccacag
ttttttgatggtaccatatttgctcaaaaaattctgtcggccgtatatcgtttaaagcaa
gcagaacctataggaaccgtaatcgatgtacttcgagggtcgcaaaatgccacggttttg
gataaaggttataaccaattaaaaacctttgggattggtagagaaatcgcctatcgcgat
tggcagcatttaataattcaattaataaatcaagggttttgtgaaatcgcttttcataaa
aataatgtcctccgacttaccgagttttctaacaaagttttgtttgaaggcgctaaagtc
tcattaacaaaaccagttcatattccggaaccaaaagtgaaggaacgtgtaaaacgcaag
ccgaaatcaacttcgaaaactcgtgttaaaactgttgaaaacagcttgtttgagcgctta
cgccagttgcgttataaaattgctttagaagaagatattccggcatatttagtttttagt
gatgcgaccttaaaggaaattgaacgagagcgtccattaagtgaatcggactttttaagc
ataagtggtgtaggacagcgtaagcttgaagtttatggcgatgagtttatggccgagatt
ttagattttatgggttctaaagtgaataagcccaaaaagaaggcgacccatttagtcact
tacgaactttataaatcgggtttaagtgtggaagaaatttcaatggaacgtaaactttcc
accacgaccatttattcacatatcgctaaattgcacagctcaggaaaagcagtgaatatt
catgattttgtttcaaaaacagaaattgaagccgttcgaaaagcaaagcaagaacttgat
gccccaagtgctttacgtccttattacgattattttaatgccgatctagactattttaaa
atccgtttagccctaagtgtggtggataaaaattag
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