Pseudotamlana carrageenivorans: C1A40_07325
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Entry
C1A40_07325 CDS
T05295
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
taj
Pseudotamlana carrageenivorans
Pathway
taj03410
Base excision repair
taj03430
Mismatch repair
taj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1A40_07325 (recJ)
03430 Mismatch repair
C1A40_07325 (recJ)
03440 Homologous recombination
C1A40_07325 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taj03400
]
C1A40_07325 (recJ)
DNA repair and recombination proteins [BR:
taj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C1A40_07325 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C1A40_07325 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C1A40_07325 (recJ)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
N6-adenineMlase
DSPc
Motif
Other DBs
NCBI-ProteinID:
AUS05296
UniProt:
A0A2I7SHB5
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Position
1631119..1632810
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AA seq
563 aa
AA seq
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MRWTLKPIPPSEKVKSLANTLKIDPVLASLLVQRGIETYDQAKQFFRPSFKDLHDPFLMK
DMDKAVARIEKAFENNENILVYGDYDVDGTTSVALMASYLKTKHEQVYTYIPDRYDEGYG
VSYKGIEFAHENDFTLIIALDCGIKAIEKVAHAKTLGVDFIICDHHRPGDEIPDAVAVLD
PKRQDCNYPYKELCGCGVGFKLIQALASKEGKTAEDLTEYLDLVATAIGADIVPIDGENR
ALAYFGLQVVNTTPRPGIQAILKQVHKTEFTITDVVFIVAPRINAAGRMKHGNYAVTLLM
ETDEKAAEAYAEDINNYNLDRRETDKQITQEALQQIEDHNEQDRLTTVVYHESWHKGVIG
IVASRLTETYYRPTLVFTKSGDKLAASARSVKGFDVYNALEACQEHIEQFGGHKYAAGLT
LAEENYEAFKLAFEAEVSKTIDRNLLTPEIQIDAQIDLEQITPKFYRILKQFAPYGPSNM
SPVFMTENLVDTGYGKCVGADETHLRLTVKQPPSPSQMVCIGFGLGEKLALTTDGKPFSA
IYSIDENEWQGNVSLQLKLRDVK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggaccttaaagccaattccaccctcagaaaaggttaaatccttagcaaatacc
cttaaaatcgatcctgttttggccagtttattggtgcaacgtgggattgaaacctacgat
caggccaaacaattttttcgtccgagtttcaaagatcttcatgatccgtttctaatgaaa
gacatggataaggctgtggctcgtattgaaaaggcctttgaaaataatgagaatatattg
gtttatggcgattatgatgtcgatggtaccacctcggtagccttaatggcgtcgtactta
aaaaccaaacacgaacaggtttatacctatatccccgatcgctacgacgaaggttatggc
gtgtcttataaagggatagaatttgcgcatgaaaacgatttcactttaattattgcttta
gactgtggtataaaagccatagaaaaggtggcgcatgccaaaacattaggtgtcgatttc
attatttgcgatcaccacaggccaggtgatgaaattccagatgctgtcgccgtcttagat
ccgaaacgccaagattgtaactatccgtataaggaattatgtggttgcggtgtgggcttt
aaactcattcaagctttagcgtctaaggaaggaaaaacagcagaagatttaaccgagtat
ttagaccttgttgccacggctataggagccgatattgtccctattgacggggaaaaccga
gcccttgcctattttggtttgcaggtggtaaataccacccccagaccaggtatccaagcc
attttaaaacaggttcataaaacggagtttaccataacggatgtggtctttattgtagcg
cctagaattaatgccgctggccgaatgaaacacggtaattatgccgtgactttgttaatg
gaaaccgatgaaaaagcagccgaagcttacgctgaagacattaataattacaatttagac
cgccgagaaaccgataagcaaattacccaagaagcgctgcagcaaatcgaggatcacaac
gagcaagaccgactaacgaccgttgtgtatcacgaaagttggcataaaggggttattggt
atcgtggcttcgcgattaaccgaaacctattaccgacctacgttagtgtttaccaaaagt
ggcgacaaattagcggcatcggcacgatcggttaaaggatttgatgtttacaatgccttg
gaagcttgccaagaacacatcgagcagtttggaggccataaatatgctgcaggattaact
ttagctgaagaaaattatgaggcttttaaactggcttttgaagctgaggtttctaaaacc
atcgacagaaaccttttaacaccagaaattcaaattgatgcgcaaatcgatttggaacag
attactccaaaattttaccgcattttaaagcagttcgcgccttacggacccagtaatatg
tcgcccgtatttatgactgaaaatcttgtagacacaggctacggaaaatgtgttggtgcc
gatgaaacccatttacgattgacagtaaaacaaccgccatcaccatcgcaaatggtgtgt
attggttttggcttgggtgaaaaattagccttaacaaccgacgggaaaccattttcggcc
atttattctattgatgaaaatgagtggcaggggaatgtttcgttacagttgaaattgcgg
gatgttaaataa
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