Pseudotamlana carrageenivorans: C1A40_08115
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Entry
C1A40_08115 CDS
T05295
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
taj
Pseudotamlana carrageenivorans
Pathway
taj03030
DNA replication
taj03430
Mismatch repair
taj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1A40_08115
03430 Mismatch repair
C1A40_08115
03440 Homologous recombination
C1A40_08115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taj03032
]
C1A40_08115
03400 DNA repair and recombination proteins [BR:
taj03400
]
C1A40_08115
Enzymes [BR:
taj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1A40_08115
DNA replication proteins [BR:
taj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1A40_08115
DNA repair and recombination proteins [BR:
taj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1A40_08115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
AUS05437
UniProt:
A0A2I7SHQ6
LinkDB
All DBs
Position
1815756..1820141
Genome browser
AA seq
1461 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDVDNWPRCIQIAWQLHDEMGRCIESQDYLVKPDGFNIPY
DAEKIHGISTELAEEQGVSLAEVLEKFNEALAKTKFVVGQNVKFDLNIMGAEFVREAVEN
NLQELPVLDTCTEHTAELCKIPGGRYGKFKLPTLTELHEFLFNEPFAEAHNATADVEATT
RCFLELIRLEEYTKEALDVQPDYFENYKKANPEPIQLIGLKHINLKRESAKIQERIKKAQ
NVDVSSEEIKQNISELADVDFVHLHNHSQFSVLQSTMGVADIVSAAAKYNMPAVALTDHA
NMMGAFHFVNAVNRHNSGVQAKIKEAEATGATVTAKEIKPIIGCEFFVCENHLDKKRKDN
GYQIVLLAKNKNGYHNLAKLSSHAFVDGFYYLPRIDKKLIQQYKEDVMVLTGNLYGEVPS
KVLNVGENQAEEALLWWKEEFGDDLYVEIMRHNQEDENRVNPVLIELARKHDIKLVASNN
TYYQDKKDANAHDILLCVKDGEKQATPIGRGRGYRFGLPNQEYYFKSSEEMKQLFKDVPE
AISNVQEVADKVEAYQLARDVLLPAFDIPEEFKHEEDLVDGGKRGENAFLRHLTYEGAKK
RYGEPLSEEVIERLDFELSVIENTGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSVVA
YCLWITNIDPMKYDLLFERFLNPDRVSMPDIDIDFDDEGRSRVMDYVIDKYGSNQVAQII
TYGTMAAKSSIRDTARVLDLPLFDADRIAKLIPNMSKLNKIFGLDEKALASKFRAEELEK
VNELLNIADGSDLQAETLNLARTLEGSVRNTGIHACGVIITPDDITKFVPVSLAKDSDLY
VTQFDNSVVEDAGLLKMDFLGLKTLTLIKDTVKIVKAKHGIELDPDSFPLDDEKTYELFQ
RGETVGVFQYESPGMQKHLRDLKPTVFEDLIAMNALYRPGPMEYIPSFVRRKHGDEEIEY
DLPAMEEYLKETYGITVYQEQVMLLSQSLAGFTKGEADVLRKAMGKKQIAVLDKMKPKFI
EQASANGHDAKILEKVWKDWEAFASYAFNKSHSTCYAWIAYQTAYCKAHYPAEYMAAVLS
NNMNDIKQVTFFMDECKRMKLDVLGPDVNESYYKFSVNKDGAVRFGMGAIKGVGHGAVMT
IVDNRKDGPYKSIFDLAKRIDLRAANKKAFENLALAGGFDSLADTHRAQFFHDDGDGITF
LEKAIKYAQKHKENENSAQVSLFGEASEVQIAEPEVPPCESWGTMEKLSKEREVVGVYIS
GHPLDDFKTEMKTFCNAQVGMFNDLEKYVNRELVFGGVVTDVQHRVSKQGKGWALFTIED
YYDSFEFRIFGEEYLKFRHFFMPNNFVFVKAFIREGWVNKDTGKKGDPRLQFNSFQLLHD
VMENYAKKLSIQVDINDLDDKKVMDLKELIQMHPGNQSLNFDVYDTKEKVKISMPSRMQK
VRVSQELISELESRFIRFKLN
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaattttcgatacagaaaccacaggattgcctaaacgctgggacgcacccata
accgatgtagataattggccaaggtgtattcaaatcgcatggcagttgcatgacgagatg
ggacgctgtattgagagtcaggattacttggtgaaacccgatggttttaatattccttat
gatgccgagaaaattcacggtatttctaccgaattggccgaagagcaaggcgtatcttta
gctgaggttttagagaaatttaatgaggccctagcaaaaacaaaatttgtagtcggacaa
aatgtgaagttcgatttaaatattatgggcgccgaatttgtgcgtgaggctgttgaaaat
aacttgcaagaactccctgttttagatacttgtaccgagcatacggccgaactttgtaaa
atccccggtggacgttatgggaaatttaaacttccaacccttaccgaattacatgagttt
ctttttaacgaaccctttgctgaagcgcataacgcgactgccgatgtggaagccacaacc
cgctgttttttagagcttattcgtttagaagaatacacaaaggaggcgctagacgttcag
cccgattatttcgagaattataaaaaggccaatccagagccaatccagcttatcggatta
aagcatattaaccttaaacgggagagtgctaaaatccaggaacgcatcaaaaaggcgcaa
aacgttgatgtgtcttccgaagaaatcaaacaaaatatttctgaattagccgatgtcgat
tttgtgcatctgcataatcactcacagttttcggtattacaatcaaccatgggtgtggcc
gatattgtttcggcagcagcaaaatacaacatgcctgccgtggctttaaccgatcatgct
aatatgatgggggcttttcactttgtgaatgcggtaaaccgacacaatagtggtgttcaa
gccaaaattaaagaagccgaagctacgggagcaaccgttacagccaaagaaattaaaccc
attattggttgtgaattttttgtttgtgaaaatcatttagataaaaaacgaaaagacaat
gggtatcaaattgtcttactcgctaaaaataaaaatggctatcataacctagccaaatta
tcatcgcatgcctttgtagatggcttttattatttgcctagaattgataaaaaattaatt
cagcaatataaagaagatgtcatggtgctcaccggaaacttatatggtgaggtgccaagt
aaagtgcttaatgtaggtgaaaaccaggcagaagaagcacttttgtggtggaaagaagag
tttggcgacgatttgtacgtcgaaatcatgcgccacaatcaagaggatgaaaatcgtgtt
aatcccgtgcttatagaattggcgcgtaaacacgatatcaaattagtagcttcaaacaac
acgtattaccaagataaaaaagatgctaatgcgcacgatattttactttgtgtaaaagat
ggtgaaaagcaggccacaccaattggtcgcggacgcggataccgattcggattgccaaat
caggaatactattttaagtcttccgaagaaatgaaacagctttttaaggatgttcctgaa
gcgatttctaatgtacaggaggttgcagataaggttgaggcataccaattagcacgtgat
gttttattaccagcttttgacattcccgaggaatttaagcatgaggaagatttagttgat
ggtggtaagcgtggtgaaaatgcttttttacgacatttaacttatgaaggcgctaagaaa
cgttacggcgaacccctttcggaggaagttattgaacgtctcgatttcgagttaagcgtt
attgaaaataccgggtatccggggtatttcttaattgttgaagattttattcgcgaggcc
agaaatatggatgtttcggtggggccaggacgtggttcggcagcagggtcggtggtagcc
tactgcttgtggattaccaatattgaccccatgaagtacgatttgctttttgagcgtttc
ttaaatccggatcgtgtgagcatgcccgatatcgatattgatttcgatgatgaaggtcga
agccgtgtaatggattatgtcattgataaatacggctccaatcaggtggcacaaattatc
acttacggtaccatggctgcaaaatcgtctattcgagatacggcacgtgtactggattta
ccgctttttgatgccgatagaattgccaagttgattccgaatatgtctaagctgaataaa
atatttggtttagatgaaaaagcattggcgtctaaatttagagctgaagaattagaaaaa
gtaaatgagcttttaaatattgccgacggaagcgatttacaagctgaaactttaaatcta
gcccgaactcttgaaggttcggttagaaatacgggtatacatgcctgtggggtgattatc
acaccagacgatattaccaagttcgttcctgtgtctctagctaaggattccgatttgtat
gtcacccagtttgataactcggtggtggaagatgcgggactgctaaaaatggatttcttg
ggactgaaaaccttaacccttattaaggatacggttaaaattgtaaaagccaagcatggt
attgagctcgatcccgatagttttcctttagatgatgagaaaacctacgaattgttccaa
cgtggtgaaacagttggggtgttccagtacgaatcccctggtatgcaaaaacaccttcgc
gatttaaaacctacggtttttgaagatttaattgccatgaatgccttgtatcgtccgggg
cctatggaatatattccgagtttcgttagaagaaagcatggcgatgaagagattgagtac
gatttaccagccatggaagagtacctcaaggaaacttatggtattacagtatatcaagag
caggtaatgcttctgtctcaaagtcttgcaggatttacaaagggtgaggccgatgtactg
cgtaaggcgatgggtaaaaagcaaattgcggtacttgataaaatgaagcctaagtttatc
gagcaagcaagcgccaacggtcatgatgctaaaattttagagaaagtttggaaagactgg
gaagcctttgcgagttatgccttcaataaatcgcactccacttgttatgcatggattgct
taccaaaccgcttattgtaaagcgcattatcctgccgaatatatggcggccgtgctttct
aataatatgaatgacattaagcaggtcacgtttttcatggacgaatgtaagcgtatgaag
cttgatgtactagggcccgatgtgaatgagagttactataagttttcggtaaataaagat
ggggccgttcgttttggaatgggagccattaaaggtgttggtcatggtgccgtgatgact
attgttgataatcgtaaagatgggccatataaatccatattcgatttagcaaaacgtata
gatttaagagctgccaataaaaaagcttttgaaaacctagcgttagctggcggctttgat
agtttggccgatacccatcgcgcacagttttttcatgatgatggcgatggtattactttt
ttagaaaaagccattaaatacgctcaaaagcataaagaaaatgaaaactcggcacaagta
agtctgtttggcgaagctagtgaggtacaaatagccgaacccgaagtgccgccttgcgag
tcgtggggtaccatggagaagctaagtaaggagcgtgaagtggtaggggtttatatttct
ggccatcctttagatgattttaaaaccgaaatgaaaaccttctgtaacgcgcaggtaggt
atgtttaacgatttagaaaaatatgtaaaccgcgagttggtttttggtggtgtggtaacc
gatgtgcagcatcgtgtgagcaagcaaggtaaaggatgggctttatttactattgaagat
tactacgatagttttgagtttagaatttttggcgaggagtatttaaagttcagacacttt
tttatgcctaataattttgtgtttgtaaaggcttttattcgtgaaggttgggtgaataaa
gacacagggaagaaaggcgatccgaggttgcagtttaacagctttcagttgcttcatgat
gtcatggagaattacgctaagaagctttctattcaggtggatattaatgatcttgacgat
aaaaaggtgatggatttaaaggagctaattcaaatgcacccaggaaatcaatcgcttaat
tttgatgtttacgatactaaagaaaaggtgaaaatatccatgcctagtagaatgcaaaaa
gtaagagtgagtcaggagttgatttccgaactggaatctcgatttataaggtttaaatta
aactaa
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