Pseudotamlana carrageenivorans: C1A40_10025
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Entry
C1A40_10025 CDS
T05295
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
taj
Pseudotamlana carrageenivorans
Brite
KEGG Orthology (KO) [BR:
taj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taj03032
]
C1A40_10025 (topA)
03400 DNA repair and recombination proteins [BR:
taj03400
]
C1A40_10025 (topA)
Enzymes [BR:
taj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C1A40_10025 (topA)
DNA replication proteins [BR:
taj03032
]
Prokaryotic type
DNA Topoisomerases
C1A40_10025 (topA)
DNA repair and recombination proteins [BR:
taj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C1A40_10025 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
RP-C
Motif
Other DBs
NCBI-ProteinID:
AUS05784
UniProt:
A0A2I7SIV9
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Position
2265417..2267924
Genome browser
AA seq
835 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFKVESSFGHISDLPSKELGVDVEGDFKPKYEVSKDK
KAVVKKLKDLAKKAEMVWLASDEDREGEAIAWHLAGTLKLDKEKTKRIVFHEITKSAIQK
AIENPRGIDYDLVDAQQARRVLDRIVGYELSPVLWRKIKGGLSAGRVQSVSVRLIVEKER
EIEGFTPVASYRIDAEFSNEDGQTFKAKLPKNFSTKEEAQKFLEQNATADFKVADLQKKP
AKKSPAAPFTTSTLQQEASRKLYFSVSKTMTMAQRLYEAGLITYMRTDSVNLSDEARQGA
EAEIKNAYGAEYSKPRNYKGKSKGAQEAHEAIRPTSFATHSVDIDRDQARLYDLIWKRAI
ASQMSEAELERTNVKINASTHKETFTANGEVITFDGFLKVYLEGTDDEDVEHEGMLPALR
VNETLLNNYITATERYTRPPARYTEASLVKKLEELGIGRPSTYAPTISTIQNRNYIEKGT
VDGVERDYTQLTLSNGQVKDKTLTEKVGSDKGKLVPTDIGMIVTDFLVNHFDAILDYNFT
AKVEADFDEIAEGNEDWTKMMKNFYKDFHPVVEDVKENADRESGERILGKDPKTGKQVSV
RLGRFGPMVQIGTVDDEEKPQFASLGPDQQLTTITYEEAMDLFQLPKTLGDFQGEEVLVN
NGRFGPYVKFGDAFVSLPKGVDPLSVELDDAIVLIKEKQKADAPIYMYKDLPVQKGKGRF
GPFIKWNNMFINVNKKYDWDNLSDEDIVELIETKIQKEIDKVIHNWEDEGIRVEKARWGR
HNVLKGKIKVELPKTVDVTDMTLEEAQGIIEANTPKKKTTKRKPAAKKKPAAKKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaatttagtgatcgtagagtcacctgcaaaggcaaaaaccattgaaaaattt
ctaggtaaagattttaaagttgaatcgagtttcggacacatttccgatttaccatccaag
gaattaggcgttgatgttgaaggtgactttaaaccaaaatacgaagtatcaaaagataaa
aaagcagttgtaaaaaaactgaaagacttagcgaaaaaggccgaaatggtttggttggca
agtgatgaggatcgtgaaggagaggctattgcatggcatttagccggaacgctaaaatta
gataaagaaaaaacaaaacgtattgtttttcatgagattactaaatcagctattcaaaaa
gccattgaaaaccctagaggtatcgattacgatttggttgatgcccagcaagcccgtcgt
gtcctagatcgtattgtaggttatgagttgtcaccggtactttggagaaaaattaaagga
ggcctgtcagcagggcgtgtacagtcggtttctgtgcgtttgattgttgaaaaagaacgc
gaaattgaaggttttacccccgtggcttcttatcgaatcgatgccgaattttcaaatgaa
gacggacaaacctttaaagcaaaacttcctaaaaacttttcaaccaaagaagaggctcaa
aagtttttagaacaaaatgctacagccgattttaaagttgcagatcttcaaaagaaacct
gctaaaaaatcgccagcagcaccatttacaacatcaacacttcaacaagaagcttctcgt
aaactgtatttttcagtaagtaaaaccatgactatggcgcagcgcctgtatgaagcgggt
ttaattacttatatgagaaccgatagtgtaaatttatcagatgaagcccgtcaaggtgcc
gaagctgaaatcaaaaatgcctacggagcagaatatagcaagccaagaaattataaagga
aagtccaaaggggcgcaagaggctcacgaagcgattcgtccaacgagttttgcaacccat
tcggtagacatcgatagagatcaagctcgtttatacgatttaatttggaaacgtgccatt
gcatcgcaaatgagtgaggctgaattggaacgtactaatgtgaaaattaatgcgtcaacg
cataaagaaacattcacagctaacggcgaagtgatcaccttcgatggtttcttaaaagta
tatttagaaggaacagatgatgaagatgtagaacatgaaggaatgttacctgctttacgg
gttaatgaaacactacttaataattatatcacagctaccgagcgttatacacgtcctcca
gcacgatatacagaggcttcattggttaagaagttggaagaacttggtattggtcgtcca
tcaacttatgcgcctacgatttctaccattcaaaatagaaattatatcgaaaaaggtacc
gtagatggcgtagaacgtgactatacgcaacttacactaagtaacggacaagtaaaagat
aaaacccttactgaaaaagtaggttcagataaagggaaattagtgcctaccgatatcggt
atgattgttaccgattttcttgtgaatcattttgatgcgattttagattacaattttact
gcaaaagtagaagcagattttgatgaaattgctgaagggaatgaagactggaccaagatg
atgaaaaacttctataaagattttcatcctgtagtagaagatgtgaaagagaatgccgat
cgtgaatctggtgaacgtattttgggtaaagatccaaaaacaggcaagcaggttagcgtg
cgtttaggacgtttcggacctatggtgcaaattggaacggttgacgatgaagaaaaaccg
caattcgcgagtttagggccagatcagcaattaacaacaatcacttatgaagaggctatg
gatttattccagcttcctaaaactttaggggattttcaaggtgaagaggtgttggtgaat
aatggacgtttcggaccttatgtgaagtttggtgatgcgtttgtatcgctacctaaaggt
gttgaccctttaagcgttgaactggatgatgctattgttttaattaaagaaaaacaaaaa
gcagatgcgcctatttatatgtataaggatttacctgttcaaaaaggtaaagggcgtttc
ggaccatttattaaatggaacaacatgttcattaatgtgaataaaaaatacgattgggat
aacctatcagatgaggatattgttgaattaattgaaacgaaaattcaaaaggaaatcgat
aaggttattcataattgggaagatgaaggtattcgtgtagagaaggcccgatggggaaga
cataacgtgttaaaaggtaaaattaaagtagaattacctaaaacggttgatgttaccgac
atgactttagaagaagctcaaggcattattgaagccaacacaccaaagaaaaaaacaacc
aaaagaaaaccagcagctaagaagaagcctgctgctaaaaagaaatag
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