Pseudotamlana carrageenivorans: C1A40_13670
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Entry
C1A40_13670 CDS
T05295
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
taj
Pseudotamlana carrageenivorans
Pathway
taj03030
DNA replication
taj03430
Mismatch repair
taj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1A40_13670
03430 Mismatch repair
C1A40_13670
03440 Homologous recombination
C1A40_13670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taj03032
]
C1A40_13670
03400 DNA repair and recombination proteins [BR:
taj03400
]
C1A40_13670
Enzymes [BR:
taj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1A40_13670
DNA replication proteins [BR:
taj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1A40_13670
DNA repair and recombination proteins [BR:
taj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1A40_13670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
CAF1
RNase_H_2
DNApol_Exo
DEDDh_C
LamB_YcsF
Motif
Other DBs
NCBI-ProteinID:
AUS06426
UniProt:
A0A2I7SKJ3
LinkDB
All DBs
Position
complement(3137571..3138236)
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AA seq
221 aa
AA seq
DB search
MGFLNWFSVKKKNYPEFWLAYLDTFKDQVNTDISNTRFIAFDTETTGFDYTEDRVLSIGA
VSFINKKIDINQSLELYIKQDVFKAESVKIHGILKNSKVNKLTELEAIKAFLAYIKSDIL
IAHHANFDRNMINEMLLRHGLGRLKNKFIDTGALYNKSVHVIYRDEQRPHTLDELAKELN
APLVDRHTATGDALITALVFLKTLARLDKRKHLNWGYLMPK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgggctttttaaattggttttcggtaaaaaaaaagaactatccagaattttggttagct
tatctcgatacttttaaagaccaggtgaacactgatattagcaataccagattcattgct
tttgatacggaaactacgggatttgattatactgaagaccgcgttttatccattggagcg
gtatctttcataaataaaaaaattgatatcaatcaatcgctagaactgtatatcaaacaa
gatgtttttaaggctgaatctgtaaaaattcacggtattttaaaaaacagtaaggttaat
aaactcacggaactggaagccataaaagcctttttggcctatatcaaatcggatatactt
attgcgcatcatgctaattttgatcgtaatatgattaatgaaatgctgctaagacatggt
ttaggtcggttaaaaaataaatttattgataccggagcactttataataaatcggtccat
gtcatttatagagatgaacaaagaccgcacaccttagatgaattggccaaagagctcaat
gcccctttagtagacaggcacaccgccacaggcgatgcgcttattactgccctggtattt
ttaaaaacattagctcgtttagacaaacgtaaacatctaaactggggctatttaatgcct
aaataa
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