Pseudotamlana carrageenivorans: C1A40_14725
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Entry
C1A40_14725 CDS
T05295
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
taj
Pseudotamlana carrageenivorans
Pathway
taj03420
Nucleotide excision repair
taj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
taj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1A40_14725
03430 Mismatch repair
C1A40_14725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taj03400
]
C1A40_14725
Enzymes [BR:
taj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1A40_14725
DNA repair and recombination proteins [BR:
taj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1A40_14725
MMR (mismatch excision repair)
Other MMR factors
C1A40_14725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AUS06616
UniProt:
A0A2I7SL19
LinkDB
All DBs
Position
3352462..3354804
Genome browser
AA seq
780 aa
AA seq
DB search
MEKYLSQLNDAQLEPTIQVDGPMIVIAGAGSGKTRVLTYRIAYMMSKGIDPFNILSLTFT
NKAAKEMKERIATIVGASEAKNLWMGTFHSIFAKILRIEADKLGFPSNFTIYDSQDSDKL
IGSIIREMQLDKDIYKAKQVRSRISSYKNSLITVRAYFQNPELKEADAMARRPRMGDIYK
EYVERCFKAGAMDFDDLLLRTNELLTRFPEVLAKYQNRFKYILVDEYQDTNHSQYLIVRA
LADKFQNICVVGDDAQSIYAFRGANISNILNFQKDYDDVKMFRLEQNYRSTKNIVNAANS
IIDKNQTKLEKIVWTANDEGGKIKVHRSLTDGDEGRYVASTILETKTKEGLNNSDFAILY
RTNSQSRAMEEALRKRGIPYRIYGGLSFYQRKEIKDVLSYLRLIVNPADEEALKRVINFP
PRGIGQTTVDRLIVGANGYKRTIFEVMKNIDKTDLKINSGTKNKLKDFVTLIESYQVLNQ
TADVFELAEHVTRTSGLLKEFGKDTTPEGVTRVENIEELINGMKDFVEGQIEIADATGSL
SEFLEDVALSSDLDNETEDDDEVALMTIHLAKGLEFSNVFIVGLEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYALSRYRWGKLVDSDPSRFIEEIDEQYLEVLTPMEERR
INPMLSADIFGDTEPNKIRYKPAKQPTFTKNKTPKKEPEKYVAPTTRNLKPVAKSSESSG
GSNLFDNKLAVGNKVKHIRFGTGEVLKIEGAGADVKAEINFQHGGTKKLLLRFAKLEVIG
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaatacttaagccagttaaatgacgctcaattagagcctacaatacaagttgac
ggacccatgattgttattgcaggtgctggatctggaaaaacaagagtgctaacttaccgc
attgcttacatgatgagcaaaggcatcgatccttttaatatcttatcgctcacctttacc
aataaggcggctaaggagatgaaagagcgtattgcaactattgtaggcgctagtgaggca
aaaaacctgtggatgggaacttttcactccatttttgctaaaattcttagaattgaggct
gataaacttgggtttccaagtaattttaccatttacgactctcaagattccgataaactt
attggatctatcattcgagaaatgcaactcgataaagatatttataaagctaaacaagta
cgttcccgtatttcatcatataaaaatagtttaattacggttcgtgcatattttcaaaat
cctgaattaaaagaagctgatgcgatggcaagacgtccgcgcatgggtgatatttacaaa
gagtatgtcgagcgttgctttaaagcgggtgctatggatttcgacgatttacttttaaga
accaatgagcttttaactcgatttcctgaagtattagcaaaatatcaaaaccgttttaaa
tacattttggttgatgagtaccaagataccaaccattctcaatatttaattgttagagcc
ttagccgataaatttcaaaatatttgtgtagtaggtgatgatgcccaaagtatctatgcc
ttccgtggtgcgaacattagtaatattttaaatttccaaaaggattatgatgatgtgaaa
atgttccgattggagcaaaattaccgttctacaaaaaacattgtaaacgcagcaaactcc
atcatcgataaaaaccaaacgaagcttgaaaaaattgtttggacagccaatgacgaaggc
ggtaaaattaaagtacaccgttccttaaccgatggtgatgaagggcgttatgtggccagt
accatcctagagactaaaactaaggagggcttaaacaacagtgattttgcgattttatat
cgtaccaattcacagtctcgtgccatggaggaagccttgcgtaagcgtggtattccgtat
cgtatttatggcggtttgtccttttaccagcgtaaagaaattaaagacgttttatcatac
ttacgtttaattgtaaatcctgccgatgaggaagctttaaaacgtgttattaattttcca
ccccgaggcattggtcaaaccacggtagataggcttatagtaggcgctaatggttacaag
cgtaccatttttgaagtgatgaaaaacatcgataaaaccgatcttaaaattaattcaggt
actaaaaacaagctaaaagactttgtaactttaattgaaagttatcaagttttaaatcag
actgccgatgtttttgaattggcagagcatgtgaccagaaccagtggtttattaaaagaa
tttggtaaagataccactcctgaaggggtaacacgtgtcgaaaatatcgaagagcttatt
aacggtatgaaagatttcgttgaaggccagattgaaatcgctgatgcaacgggctcttta
tcggaatttttagaagatgtggctttatctagtgatttggataatgaaacagaagatgat
gatgaggtggctttaatgaccattcacttagcaaaggggttagagttttcgaatgtgttt
attgtggggttggaagaagatttatttccaagtgccatgagcatgaataccagaagtgag
ctagaggaggagcgacgtttgttttacgtagcgcttacccgtgctgagaagcaagcgtat
ttaacttatgctttgtcgcgataccgttggggaaaattggtagattctgatccgagtcga
tttattgaagaaatagacgagcaatatttagaagtgctaacaccaatggaagagcgtcgt
ataaatccgatgctttctgctgatatttttggagataccgagcctaataaaattcgttat
aaaccggctaagcaaccaacattcactaaaaataaaacccccaaaaaagaacctgaaaag
tatgtagcacctacgaccagaaatttgaagcctgtagctaaatcttcagaaagtagtggt
ggctcaaatttatttgataataagttggctgtgggtaataaagtcaagcatatcagattt
ggaaccggagaggtgttaaaaattgaaggtgctggtgccgatgtaaaagcagagattaat
tttcagcatggagggactaaaaagttgttgcttcgttttgctaagttggaggtgattggg
tag
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