KEGG   Pseudotamlana carrageenivorans: C1A40_14980
Entry
C1A40_14980       CDS       T05295                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
taj  Pseudotamlana carrageenivorans
Pathway
taj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:taj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C1A40_14980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:taj03400]
    C1A40_14980
DNA repair and recombination proteins [BR:taj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C1A40_14980
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      C1A40_14980
SSDB
Motif
Pfam: ABC_tran UvrA_inter SMC_N UvrA_DNA-bind AAA_21 AAA_16 AAA_29 RsgA_GTPase nSTAND1 nSTAND3 DnaJ_CXXCXGXG AAA_22 AAA_33 AAA_25 AAA_18 Viral_helicase1 NACHT ATPase AAA_15 AAA_23 cobW NTPase_1 T2SSE
Other DBs
NCBI-ProteinID: AUS06666
UniProt: A0A2I7SL71
LinkDB
Position
complement(3410388..3413171)
AA seq 927 aa
MKSITKNENPKENIIIKGAQLHNLKNIDVTIPRNKLVVITGLSGSGKSSLAFDTLYAEGQ
RRYVESLSSYARQFLGRLNKPKVEYIKGIAPAIAIEQKVNSTNPRSTVGTTTEIFDYLKL
LFARIGKTYSPISGLEVKKDTVTDVIKYIKTFPENEKMLLLAPIILEEGRSMEDKLKTLN
QQGYSRVKVNNDVFRIDQVENISKSDTFFLVVDRIVKKESEDFYNRLADAIQTAFYEGKG
SCFIENLSTKTQRHFSNKFELDGLTFLEPNIHLFSFNNPYGACPKCEGYGDIIGIDEDLV
IPNTGLSVYENAIFPWRGDSMSWYKDQLVNHSHKFDFPIHKPYFELTEDQKQLIWTGNQY
FEGLNTFFSELEAKAYKIQNRVMLSRYRGKTKCKACQGKRLRTEANYVKISDATISDLVE
TPLDQLALFFKQLQLNEYDLKVAKRLLTEINNRLEFLSNVGLDYLTLNRKSNTLSGGESQ
RINLATSLGSSLVGSMYILDEPSIGLHPKDTEKLISVLKSLRDLGNTVIVVEHDEDIMKA
SNNIIDIGPEAGTLGGEVVAQGDFKTILKSESLTAKYLNGTLNIKVPKTRRTSKYYIDIL
GARENNLKNIDVRFPLGMLTVVTGVSGSGKSTLVKKILYPVVQKKLTDFSDKAGQFTALE
GHFSNINHIEFVDQNPIGRSSRSNPVTYIKAYDDIRALFSKQKLSNIRNYQPKHFSFNVD
GGRCESCKGEGEVTIEMQFMADVHLECETCKGKRFKKEILEVTYGGKNIDDILNLTIDDA
IQFFEANEQTKIKNKLQPLQDVGLGYVTLGQSSSTLSGGEAQRIKLASFLGKGNNKEKAL
FIFDEPTTGLHFHDIQKLLKSFNALISKGHSIIVVEHNIDLIKCADFIIDLGPGGGDKGG
YLVASGTPEDLIKNNKSEIAKYLKEKL
NT seq 2784 nt   +upstreamnt  +downstreamnt
atgaaatccatcaccaagaacgagaaccctaaagaaaatattataataaaaggtgcccaa
ttgcacaatttaaaaaatattgatgtcaccatacctagaaacaaactcgtggtaattaca
gggttatcgggttcggggaagtcaagcttagcctttgataccctgtatgctgaaggacag
agacgttacgtggagagtttatctagctatgctaggcaatttcttggacgtttaaacaaa
cccaaagtagaatatattaaaggcatagcacctgccattgctattgaacaaaaagttaat
tctacgaatccgcgatcaacagtaggtactaccaccgagatttttgactatctaaaactt
ttgtttgctagaattggcaaaacctactcgcctatttctgggttagaagtcaaaaaagac
accgttacagatgttataaaatacataaaaacctttcctgaaaacgaaaaaatgcttcta
ctagcacccattatcctagaggaagggcgcagcatggaggataagttaaaaacacttaat
caacaaggatactcaagagtaaaggttaataatgatgtatttagaattgatcaagtagaa
aacatatctaagtcagacacctttttcttagttgttgatcgtattgttaaaaaagaaagt
gaggatttctataatcgtctagccgatgcgattcaaacagcattttatgaaggcaaaggc
tcttgttttatagaaaacctgagtaccaaaactcagcgacactttagtaataaatttgaa
ttagacgggttaacatttttagaacccaatattcatttattcagctttaacaacccttac
ggcgcttgcccgaaatgtgaaggctacggagacattataggtatagacgaagaccttgtt
atacccaacacagggctttctgtttatgaaaacgccatattcccatggcgtggagacagc
atgagctggtacaaagaccaacttgtaaaccattctcataaattcgattttcctattcac
aagccatattttgaacttactgaagatcagaaacaattaatttggactggaaatcaatat
tttgaagggctaaatacatttttctccgaacttgaagctaaagcttataaaattcagaat
cgtgtcatgctttctcgttaccgaggaaaaacaaaatgtaaagcttgtcaaggtaaacga
ttacgaactgaagctaattacgttaaaatttctgacgctaccatttctgatcttgtggaa
acgcctttggatcaactagccttgtttttcaaacagttacaattaaacgaatacgattta
aaagtcgctaaacgacttctaaccgaaataaacaacagattagaatttctttctaacgtt
ggcctagactacctaaccttaaatcgaaaatcaaataccctttctggaggtgaaagtcag
cgtattaatttagctacctccctaggtagtagcttagttggttccatgtatatattagac
gaaccaagtataggtctacaccctaaagacactgaaaaactcatttctgttttaaagtct
ttacgagatttaggcaataccgttattgtcgtagagcacgatgaagatatcatgaaagcc
tcaaataatatcattgatattggtcctgaagcaggaactttaggaggcgaggtagttgct
caaggggattttaaaaccattttaaaatctgaatcactaacagcaaaatacctaaacggt
actttaaatatcaaggttcctaaaaccagacgaacctctaaatattacattgacattttg
ggtgctagagaaaacaacctaaaaaatatcgatgtgcgcttccctttaggcatgcttacc
gtagttacaggagtatcaggaagcggaaaaagcacattagtaaaaaaaatattgtatcct
gttgtgcaaaagaaactcacagattttagtgataaggcagggcaatttactgctctagaa
ggccatttcagcaacataaatcatattgaatttgtagatcaaaacccaattggaagatca
tcacgatcaaatcctgtgacctacatcaaggcttatgatgacattcgagcactgttctct
aaacaaaaactaagcaatataagaaactaccaaccgaaacatttttcatttaacgtagat
ggcggacgctgtgaaagttgtaaaggtgaaggtgaagtaaccattgaaatgcaatttatg
gccgacgtgcatttagaatgtgaaacttgtaaaggaaaacgattcaaaaaagaaattctc
gaagtaacatatggcggaaaaaatattgatgatattttaaatctaactatcgatgatgct
attcaattttttgaagctaacgaacaaacaaaaattaaaaacaaacttcaacctcttcag
gatgtcggtttaggctatgtgacactaggacaaagctcctcgaccctttcaggaggagaa
gcacaacgtattaaacttgcttcatttttaggaaaaggcaacaataaagagaaggcctta
ttcatttttgatgaacccactacagggcttcattttcatgatattcaaaagcttttaaaa
tcatttaatgctttaatttctaaaggacattctattatagttgttgaacataatattgac
ctcattaaatgcgctgattttataattgatttaggccctggcggaggtgataaaggagga
tatttagttgcctcaggaactcctgaagaccttattaaaaacaacaagtctgaaatagct
aaatacctaaaagaaaaactttaa

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