Pseudotamlana carrageenivorans: C1A40_17640
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Entry
C1A40_17640 CDS
T05295
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
taj
Pseudotamlana carrageenivorans
Pathway
taj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C1A40_17640 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taj03400
]
C1A40_17640 (priA)
Enzymes [BR:
taj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1A40_17640 (priA)
DNA repair and recombination proteins [BR:
taj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C1A40_17640 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
AAA_30
Cas3-like_C_2
TrmB
nSTAND3
AAA_11
Nrap_D6
DUF7375
DUF802
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AUS07142
UniProt:
A0A2I7SMM2
LinkDB
All DBs
Position
complement(4022907..4025360)
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AA seq
817 aa
AA seq
DB search
MVDFIDVIIPIPLKKLFTYTVTPAEAEFLKPGMRVAVPFGKSKIYTGLVFSVHKNEPAAY
EAKDIQQILDDTPIVNAQQLKFWQWIASYYMCTLGDVMRAALPNAFILESETVVTKGKVA
IIDDSVLKDDEFLVYEALQHQSTLKIQDISNILGKKNVLHVIKGLIEKEAVLVEEEVYEK
YKPKLVRYVKLQTSYTSEKAFHELMEELSRAPKQRDVVLTLFSISAKTKKPVKVTDLVTE
SGASSSVVKALIDKGVLEEYHIQTDRVEYSGEDTEASKHLNEHQETALTEINSSFQSHAV
TLLHGVTSSGKTEVYVKLIEAVLQQGRQVLYLLPEIALTTQLITRLQNYFGEQVAVFHSK
YSAHERVEVWNQVLTNSAKAQIVLGARSSIFLPFNHLGLIVVDEEHEQSFKQFDPAPRYH
ARDAAVVLAHLHQAKTLLGSATPSLESYYNARQNKYGFVELLYRYNNVLMPDIELVDIKD
KQKKKRMKGHFSDRLIEEMTETLAEGHQIILFQNRRGFSPIVECKTCGHAPECPNCDVSL
TYHQYRNQLRCHYCGYQAAMIQDCLACGGQDLDSKGFGTEQIEEEVKILFPDYKVARMDL
DTTRGKYGYEKIITALEQQEIDILVGTQMLTKGLDFRNVKLVGIMNADNMLNFPDFRAHE
RSFQLMLQVAGRAGRTAERGKVLIQTYNPHHNILQQVSTNNYIDMFKEQMNDRYNFKYPP
IYKQIKITLKHKDFNRVETASIWFAKSLRQVFGDYVLGPEAPPVARIRNQFHKNILVKIP
KKHSLAKTKEAIIKINNSFESVKDFRSVRVILNVDNF
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggtagattttattgatgttattattccaattcctttaaaaaagctgtttacctataca
gtgacacctgctgaagccgaatttttaaaaccaggtatgcgtgtggctgtgccatttggg
aaatctaaaatttacaccggactcgtttttagtgtgcacaaaaatgagccagcggcatat
gaagctaaagatattcagcagatattagatgacacccccattgttaatgcccagcaatta
aaattttggcagtggatagcaagctactatatgtgtaccttgggcgatgtgatgcgtgca
gcgcttcctaatgcttttattttagaaagtgaaacggtggtaaccaaaggtaaagtcgct
attatagatgattctgttttaaaggatgacgagtttttggtttatgaagccttacagcat
caatcgacgttgaaaattcaggatatttcaaatattttaggaaagaaaaatgtacttcat
gtgattaaagggcttattgaaaaggaggctgttttagttgaagaggaagtttatgaaaag
tacaaaccaaaactagttcgttacgtaaaactgcaaacaagttatacgagtgaaaaggct
tttcatgaattgatggaggaattaagtagggcgcccaaacaacgtgacgttgttttaacc
ttgttttcaatttcggctaaaacgaaaaaaccagttaaagttaccgatttggttaccgaa
agtggtgcctcttcgtctgtcgttaaagctttaattgataagggtgttttagaagagtat
cacattcaaaccgatcgcgtagaatattctggagaagataccgaggcatcgaaacattta
aacgaacatcaggaaacggcgttaaccgaaataaattctagttttcaatcgcatgcggta
accttgttgcatggggtaacatcatcggggaaaacagaggtttatgttaaacttattgaa
gcggtgcttcagcaaggacggcaagtcttgtatttacttccagaaatcgctttaacgaca
caacttattacaaggcttcaaaattatttcggggagcaagtggcggtgtttcattctaag
tattcggctcatgagcgtgtagaggtgtggaatcaagtattaaccaattccgcgaaagcg
caaattgtattaggcgcaagatcttccatttttttaccttttaatcatttagggttgatt
gtggttgatgaagaacacgagcagtcatttaaacaatttgatccagccccgcgatatcat
gcccgagatgcggcagtggtattagcgcacttgcatcaagctaaaaccttactgggatcg
gcgacaccaagtttagagagttactataacgctaggcaaaataaatatggttttgttgaa
ttattataccgatacaataatgttttaatgccagatattgagctagtcgatattaaagac
aagcagaaaaagaagcggatgaaagggcattttagcgatcggttgattgaagaaatgacc
gaaactttggctgaaggtcatcaaattatcttatttcaaaatcgtcgcggattttcacca
atcgtggagtgtaaaacatgtggtcatgcgccagagtgtccaaattgcgacgtgagttta
acctatcatcaataccgaaaccagttgcgttgccattactgcggttatcaagccgctatg
atacaagattgtttggcttgtggcggacaagatttagacagcaaaggttttggtaccgag
caaatcgaggaggaggttaaaatattgtttcccgattataaggtggcccgaatggatttg
gatacaacccgggggaaatacggttatgaaaaaattattacagctttagagcagcaagaa
attgatattttggtgggtacacaaatgcttactaaaggattggattttaggaatgtgaaa
ttggtggggattatgaacgccgataacatgcttaattttccagattttagggcgcatgag
cgtagtttccaattgatgttacaagttgcgggtagggcaggacgtacggcagagcgtggt
aaagttttaattcagacttataatccgcaccataacatattacagcaggtgtctacaaat
aattatatcgatatgtttaaagagcaaatgaacgatcgttataattttaagtatcctcct
atttataagcaaataaagattacgctaaagcacaaagattttaatcgggtggaaaccgca
tcgatttggtttgctaagtcactccgacaagtttttggagattatgtattaggaccagaa
gcgcctccggtggctagaattagaaatcagtttcacaaaaacattttggttaaaattcct
aaaaaacactcactagctaaaacaaaagaagctattattaaaattaataatagcttcgaa
agtgtaaaagattttagatctgttagagtaattttaaatgtcgataatttctag
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