Thauera aromatica: Tharo_0445
Help
Entry
Tharo_0445 CDS
T05381
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tak
Thauera aromatica
Pathway
tak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tharo_0445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tak03019
]
Tharo_0445
Enzymes [BR:
tak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Tharo_0445
Messenger RNA biogenesis [BR:
tak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Tharo_0445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25_NTPase-like
CMS1
UvrD-helicase
HI1480
AAA_22
CARD_2
Motif
Other DBs
NCBI-ProteinID:
AVR87394
UniProt:
A0A2R4BJN5
LinkDB
All DBs
Position
complement(461918..463354)
Genome browser
AA seq
478 aa
AA seq
DB search
MNSEVTFASLGLAEPLLRAIGEVGYSTPTPIQAQAIPQVLAGGDLLAAAQTGTGKTAGFT
LPLLHMLAATHAHPHPPGRPRCLILTPTRELAAQVEESVKTYGKHLPLTSLVMFGGVNIN
PQIAALKKRVDILVATPGRLLDHVGQKTLDLSGVEILVLDEADRMLDMGFIRDIRKILTL
LPKKRQNLLFSATFSDEIRQLAGGLLHNPGTVEVAPRNTTAERVDQAVYQVGQKHKRELL
AHLIKEKQWFQALVFTRTKHGANKLAEYLSKHDIGAAAIHGNKSQAARTRALAQFKDGSL
PVLVATDIAARGLDIDQLPQVVNFELPNVPEDYVHRIGRTGRAGAAGNAISLVDGEEIKL
LSAIERLIKRRIERVTAEDFVPSAGAEAAHDADHQRDPLPRRGGNRPERSRSQAPARQGT
PGSAARPGERPAAPAPGHRANPAAGRRRRAAKRTATAPRARPKAVKSTATASRPRAPR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgaagtgactttcgccagcctcgggctggccgaacccctgctgcgcgccatc
ggcgaagtcggctattccacgccgacgccgatccaggcccaggccattccccaggtcctc
gccggcggcgatctgctcgccgccgcccagaccggcaccggcaagaccgccggcttcacc
ctgccgctgctgcatatgctggccgcgacccatgcccacccccatccgcccggccgcccg
cgctgcctgatcctgaccccgacccgcgaactcgccgcccaggtcgaggagtcggtgaag
acctacggcaagcacctgccgctgacttcgctggtgatgttcggcggggtcaacatcaac
ccgcagattgcggcgctgaaaaagcgcgtcgacatcctcgtcgccaccccggggcggctg
ctcgaccacgtcggccagaagacgctcgacctctccggcgtcgagatcctggtcctcgac
gaagccgaccgcatgctcgacatgggcttcatccgcgacatccgcaagatcctcaccctg
ctgccgaagaagcgccagaacctgctgttctcggcgaccttctccgacgagatccgccag
ctcgccggcggcctcctgcacaatcccggcacggtggaagtggcgccgcgcaacaccacc
gccgaacgcgtcgatcaggcggtgtaccaggtcgggcagaagcacaagcgcgaactgctc
gcccacctgatcaaggaaaagcagtggttccaggcgctggtattcacccgcaccaagcac
ggcgccaacaagctcgccgagtacctcagcaagcacgacatcggcgccgccgcgatccac
ggcaacaagagccaggccgcgcgcacgcgggcgctcgcccagttcaaggacggctcgctg
ccggtgctggtcgccaccgacatcgctgcgcgcgggctggacatcgaccagctgccgcag
gtggtgaacttcgagctgccgaacgtgcccgaagactacgtgcaccgcatcggccgcacc
ggccgtgccggtgccgcaggcaacgcgatctcgctcgtcgacggcgaggagatcaagctg
ctgagcgcgatcgagcgcttgatcaagcgccgcatcgagcgcgtcaccgccgaagacttc
gtgcccagcgccggcgccgaggcggcccacgacgccgatcaccagcgcgacccgctgccg
cgccgcggcggcaaccgtccggagcgtagccgcagccaggcccccgcacgccagggcacg
cccggcagcgcggcgcgccccggcgagcgtccggccgcccccgcgccggggcaccgggca
aacccggcggccggccgcaggcgccgcgcggcgaagcgaacggcaaccgcgccccgcgcc
aggccgaaggccgtgaaatcgacggcaaccgccagccggccgcgcgccccgaggtga
DBGET
integrated database retrieval system
