Thauera aromatica: Tharo_0713
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Entry
Tharo_0713 CDS
T05381
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tak
Thauera aromatica
Pathway
tak03420
Nucleotide excision repair
tak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tharo_0713
03430 Mismatch repair
Tharo_0713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tak03400
]
Tharo_0713
Enzymes [BR:
tak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tharo_0713
DNA repair and recombination proteins [BR:
tak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tharo_0713
MMR (mismatch excision repair)
Other MMR factors
Tharo_0713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
UvrD_C_2
DEAD
PhoH
IstB_IS21
RuvB_N
nSTAND3
TGL
Motif
Other DBs
NCBI-ProteinID:
AVR87655
UniProt:
A0A2R4BK06
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All DBs
Position
complement(726841..728562)
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AA seq
573 aa
AA seq
DB search
MTVEQDWTPQKRDFLQSTGHVLAMGGPGSGKTHVALVKARDEIRSAKLLSGQRILFLSFA
RPTVARVLEKAKELITADDLRLLDVNTYHGFAWSVLRSHGYLLSNGKPLQLLPPPEGSAR
LAHFAKEQHHQEKLRLFHEEGLLHFDLFAQLTAELLRRSRRLAGIYTATYPILVVDEFQD
TNADEWAMVRELGRGCRIIALADPDQRIYEFRGADPQRLKEFVDQFDPLPVEFEGENHRS
AGTDIATYGSDLLTGKNKGAVYANVSVVEYGVYYGRGPHFHAKAQLIQAIKRLRKEPAWS
IAVLVPSKAFMLQVSDYLSAESDGMPNLRHEVAMDAESPALAANVIATLMEGGPSELLAA
RLLSALHTHIRGRSGTKRPAQAELDMADAIDQYLVSGKIRGKNRQALISECARLAALRQD
VVFTGHPEEDWLTARGLLATSAVGQLSRVAADAKYLRLLHKGSNLRASLSELWRSQGQYV
GAIEAVRGALLQEHFTAAAKEWRGVHLMTIHKAKGKEFDEVLIYEGRYAGRIVPANADTS
RQSQALLALRVAVTRAMKRATILTPSGDRSIFL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgaacaagactggacaccgcagaagagggactttctgcaaagcacggggcac
gtgctcgccatgggtggtccaggctccggaaagacgcatgtcgccctggtcaaagccagg
gacgagattcgatcagcaaagctcctatcaggccagcgcatcctgtttctcagcttcgcg
aggcccacagtggcacgggtccttgagaaagccaaggaactcatcaccgcggatgatctg
agacttctagatgtcaacacctatcacggcttcgcatggagcgttctgcgaagtcatggc
tatctgctcagcaacggaaagccgctccagctcctaccacctcccgagggctccgcgcgc
ttggctcactttgccaaggagcagcatcaccaggagaagttgcgccttttccatgaagag
gggctgctccacttcgacctcttcgcccagttgacggctgaactgctgcgccgcagccgg
cggctggcaggtatctacacagcgacctacccgatactcgtcgtggacgagttccaggac
acgaacgccgacgaatgggcgatggtccgcgagcttggacgcggctgcaggatcattgcc
ttggccgaccccgaccagcgtatttacgaattccgcggcgccgatcctcagcggctcaag
gaattcgtggaccagttcgaccccttgccagtcgagtttgaaggggagaatcatcgcagt
gccggaaccgacatcgcaacgtacggttcagacttgctcaccgggaaaaacaagggcgcc
gtctatgccaatgtgtcggtggtcgagtacggcgtgtactacggaaggggtccgcatttc
catgcgaaggcccagctcatccaggcaatcaagcgacttcgcaaggagccggcctggtcc
atcgcagtgctcgtcccatccaaggccttcatgcttcaagtgtccgactacctctccgcg
gagtccgatggcatgcccaaccttcgccacgaggtggcgatggacgcggaatccccggcg
cttgcggcaaacgtcatcgccacgctaatggaaggaggcccttcggagcttctggctgcg
cggctactctccgccttacatacccacatccggggccgcagtggcaccaaacgccctgcg
caggcggaactcgacatggccgacgccatcgaccaatacttggtctccggaaagatccgc
ggcaagaatcgccaagcgttgatcagcgagtgcgcgcgcctagcagcgcttcgccaggac
gtcgtattcaccggccatcctgaagaagactggttgactgcgcgggggcttctcgcgacg
tctgccgttggccaactgtcgcgcgttgccgctgatgccaagtatctccgcctgcttcac
aagggctcaaacctgcgggcgtctttgtcagagctttggagatcccaaggacagtatgtc
ggcgctatcgaagctgtccggggcgctttgctgcaggagcatttcacagcagccgccaag
gaatggcgtggagttcatctcatgaccattcacaaagcaaagggtaaggagtttgacgag
gtactgatttacgaagggcgatatgctggacgaattgtgcctgcgaatgcagatacttct
cgtcaaagccaagcccttttggcactgcgggtcgcagtcacaagagctatgaagagagca
acaatcctgacgccatcgggagaccgcagcatttttttgtaa
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