Thauera aromatica: Tharo_2342
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Entry
Tharo_2342 CDS
T05381
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
tak
Thauera aromatica
Pathway
tak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tharo_2342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tak03019
]
Tharo_2342
Messenger RNA biogenesis [BR:
tak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Tharo_2342
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
Protamine_P2
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AVR89239
UniProt:
A0A2R4BPH4
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All DBs
Position
complement(2488933..2489619)
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AA seq
228 aa
AA seq
DB search
MAWSFAVRGQPDRGGVCRGCAFKACASVEKSAPINRIRRFIMLDREGFRPNVGIILVNAR
NEVFWGKRIREHSWQFPQGGIKHGESPEQAMYRELHEEVGLRPEHVKILGRTRGWLRYEV
PRHWIRREWRNTYRGQKQIWFLLRLVGRDSDVSLRASSHPEFDAWRWSDYWVPLEAVIEF
KRQVYQLALIELARILFRTRAFEMPESYRLREPVEPVRVVLGASVRGA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtcgttcgccgtgcgtgggcagccggatcgcggtggtgtgtgccgtgggtgc
gctttcaaagcgtgcgcaagtgtggaaaaatcggcaccaatcaaccgaattcgaaggttc
atcatgcttgatcgtgaaggctttcgcccgaacgtcggcatcattctggtcaatgcgcgc
aacgaggtgttctggggcaagcgcattcgcgagcattcctggcagtttccccaaggcggc
atcaagcacggcgagtctcccgagcaggccatgtaccgggaactccacgaggaagtcgga
ttgcgtccggagcatgtgaagatcctcgggcgcacccgcgggtggttgcgctacgaggta
ccccggcactggatccggcgcgagtggcgcaacacgtaccgcgggcagaaacagatctgg
tttctgctgcggctggtggggcgcgactcggacgtgtcgttgcgtgccagctcgcaccca
gaattcgatgcctggcggtggagcgactactgggtgccgcttgaagcggtgatcgaattc
aagcgccaggtctatcagctggcgttgatcgagcttgcccgcatcctctttcgcacgcgc
gcgttcgaaatgccggagagctaccgcctgcgcgaaccggtcgagccggtgcgcgtcgtg
ctgggcgcgtcggtgcgcggagcgtag
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