Thauera aromatica: Tharo_2436
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Entry
Tharo_2436 CDS
T05381
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
tak
Thauera aromatica
Pathway
tak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tharo_2436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tak03400
]
Tharo_2436
Enzymes [BR:
tak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Tharo_2436
DNA repair and recombination proteins [BR:
tak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tharo_2436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AVR89333
UniProt:
A0A2R4BQ54
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All DBs
Position
2593594..2597499
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AA seq
1301 aa
AA seq
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MTSDTLHALDSTAHAASHTLDALRFPLHGSRLIEASAGTGKTWTIAALYLRLVLGHGSRN
SDDTRHTEATAFARPLLPAEILVMTFTRAATKELSDRIRARLLEAARCFRGDTPPAPNDA
LLASLLADYADEADRRQAAWRLAMAAEAMDDAAVFTIDAWCQRMLREHAFDSGNPFDEEL
AADETALLLEAVQDYWRQQCYPLSDAPLDFVLRLWPDVNALHEDIRELVGQPLPLTDDRD
SLGACVERVMTAHHQKLITLSRGWVERAGAIKEWLDKELAANAKAWNGKKLQSRYYTPWC
ESLASWARDPLSQPLNLPDSARHRLTVDGILEARKDGAPVPELPDHFDAFAELLQHYGAL
PDPHTPLRIHAATQVAERLAQLKRKARSFGFADMLERLDQALCGPHGARLRERILGQYPV
ALIDEFQDTSPLQYRLFDALYRTADNDPGTALLLIGDPKQSIYGFRGADIYSYLQARRAT
AGRHYVLGTNYRSTHALVAAVNGWFAQAEARAGDRAVAKGGAFLCRSDEDNELPFEPVGA
EGRQEVFHTSAGPVPAMSIHHDLELRSATDSRKRFAARCAEQIVTWLNDPSAGFHHPQDG
FKRLRPADIAVLVRTGKEAAAVRLELRRRGVTSVYLSDKDSVFASNEARDLLHWLRAVAS
PLDAPLVRAALATRTVGLSIEELAWLASDDEAFDGRSEQIRQLHAVWRDLGVLTMLRRSL
HQLDLPARWLAEPEGERRLTNFLHLAELLQHASAQLDGEQALIRWLAMQIDDGAGGSEEQ
VVRLESDADLVKVVTVHKSKGLEYPVVCLPFACSFRRVERKFSPFLKLVDASGTREIKLD
YDDDDLERADHERLREDLRLFYVALTRARHALWMGFAALKIGNSNECLTHRSAPGYLLGG
LAPRTEASWQPLLEALAEQASADTSATPPCIILEATSDSVARTALQPREALPALRESPLY
TADFERRWSIGSFSALVRDIDPSAVASNQTASALPTAGALGAPSSAIAGSAQTLPEPNEP
ALTALSPLKIHRPAEDEGNDEDASGVYAPNASTRATLPPWHRFPRGAIAGNFLHDMLEWL
AGEGFALAGDPNLETALRRRCVRAGRGDWADATVEWMQNLLATPLPSLGVPLPALRTQLT
EMEFWMPSARLHAGDVDALCRRHLLNAHERPALPQRALHGMVMGFADLVFEHEGRYWVLD
YKSNSLGKTDADYDTFALESAMARHRYDVQAALYLLALHRLLRARLGTTYDPSRQLGGAL
YLFLRGIRGPCCGEYAIPATGEVIALLDTLDQQLTDEAALA
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgacatcggacacccttcacgcgctcgattccaccgcccatgcagcgtcccacaccctc
gatgccctgcggtttccgctgcatggcagccggctgatcgaagccagcgccggcactggc
aagacctggaccatcgccgcgctctatcttcgcctcgtgctcggtcacggcagcaggaac
tcggacgatacgcgccacacggaggccaccgcgttcgcgcgccccttgctgccggccgag
atcctggtgatgacctttacccgggcagcgaccaaggagctctcggaccgcattcgcgcc
cgcctgctcgaggcggcccgctgcttccggggtgacacaccgccagccccgaatgacgca
ctgcttgcgagcctgctggccgactacgccgatgaagccgatcgccgccaggcggcctgg
cggctcgcaatggccgccgaagccatggacgatgcggccgtgttcaccatcgacgcctgg
tgccagcgcatgctgcgcgaacacgccttcgatagcggcaaccccttcgatgaagagctg
gcggccgatgaaacagcgctgctgctcgaggccgttcaggactactggcgccagcagtgc
tacccgctctcggatgcgccgctcgatttcgtgctccgcctgtggcccgacgtcaatgcg
ctccacgaagacatccgcgagctggtcggccagcccctgccgctgaccgatgaccgggac
tcgctgggggcctgcgtggaacgggtgatgaccgcgcaccaccagaagctgatcaccctc
agccggggctgggtcgagcgtgcgggggcgatcaaggaatggctcgacaaggaactggcg
gccaacgccaaggcctggaacgggaagaaactgcaaagccgctactacacgccctggtgc
gagtcgctggcctcgtgggcacgggatccgctctcccagcccctgaacctgcccgacagc
gcacgtcaccgactgaccgtcgacggcatcctcgaagcccgcaaggacggcgcaccggta
cccgagttgccagatcatttcgatgccttcgccgaattgctgcaacactacggcgcgctg
cccgatccgcacacgccgctgcgcatccatgccgcgacgcaggtagccgagcgcctggcg
cagttgaagcgcaaggcgcgcagcttcggctttgccgacatgctcgaacggctcgaccag
gcgctgtgcggtccgcacggcgcgcggctgcgcgagcgcatcctcggccagtacccggtc
gccctgatcgacgaattccaggacacctcgccgctgcagtaccggctcttcgatgcgctc
taccgcaccgccgacaatgatccgggcacggcgcttctcctgattggcgaccccaagcag
tcgatctacgggtttcggggtgcggacatctacagctatctgcaggcccgtcgtgccacc
gccggccggcactacgtgctcggcaccaactatcgctccacacatgccctggtcgcagcg
gtcaacgggtggttcgcgcaggccgaagcgcgggcgggcgaccgcgcagtggccaagggc
ggcgccttcctttgccgttcggacgaagacaatgagctgcccttcgagccggtcggggcc
gagggacggcaagaggtcttccatacctccgcaggcccggttccggcaatgagcatccac
cacgacctggaactgcgcagtgcaaccgacagcagaaagcgcttcgccgcacgctgtgcc
gagcagatcgtcacctggctcaatgatccctctgcaggctttcaccacccgcaagacggg
ttcaagcgactgcgcccggccgacatcgccgtgctggtgcgcaccggcaaggaggccgca
gccgtgcgtctcgaactacgccggcgcggcgtcacctcggtgtacttgtccgacaaggat
tcggtcttcgccagcaacgaggcgcgcgacctgctgcactggctgcgcgcggtcgcatcc
cccctcgatgcgccgctcgtgcgggcggcgctcgccacccgcacggtaggtctgtcgatc
gaggaactggcctggctggcgagcgacgacgaagccttcgatgggcgcagcgagcagatt
cgtcagctgcacgcggtgtggcgcgaccttggggtgctcaccatgctgcggcgcagcctg
caccagcttgacttgcccgcacgctggctcgccgagcccgagggcgagcgacgcctgacc
aacttcctgcatctggccgaactgctgcagcacgcgagcgcacaactcgatggcgagcag
gcgctgatccgctggctggccatgcagatcgacgacggcgcgggcggcagcgaagagcag
gtggtgcgtctggagagcgatgccgacctcgtcaaggtcgtgaccgtgcataaaagcaag
ggcctggaatacccggtggtgtgcctgccctttgcgtgcagcttccgccgcgtggaacgc
aagttctcacccttcctgaagctcgtcgatgcgtccgggacgcgggagatcaagctcgat
tatgacgatgacgatctcgaacgcgctgatcacgagcgcctgcgcgaagacctgcgcctc
ttttacgtagcgctgacgcgcgcacggcacgccctgtggatgggctttgccgcgctgaag
atcggcaacagcaacgaatgcctcactcaccgcagcgccccaggctacctgctgggcggt
ctcgccccgcgcaccgaagcgtcctggcaaccgttgctcgaagccctggctgagcaggcg
agtgccgacacgtcagccacgccgccatgcatcatccttgaagcaacgagcgacagcgtc
gcccgcaccgcactgcagccccgcgaggcgctgccagcgctgcgggagagcccgctctac
actgcggacttcgagcggcgctggtcgatcgggagcttttctgcactggtgcgagacatc
gacccctcggcggtcgcatcgaatcagaccgcgagcgccctgcccacagccggtgcactg
ggagcaccgtcctcagccatcgcgggctcggcgcaaacattgcccgaacccaacgaaccc
gcgctaacagcgctctcgcctctgaagatccatcgccctgccgaagacgagggcaatgac
gaggacgcatctggcgtttatgcaccaaacgcatcgacacgggcgacgctgcccccctgg
catcggtttccacgcggcgcgattgcgggaaacttcctccacgacatgctcgagtggctc
gcgggcgaaggttttgcgctggcaggcgacccgaacctggagacggcgctacgtcgccgt
tgcgttcgtgccggccggggcgactgggccgatgcgacagtggagtggatgcagaacctg
ctggcgacgcccctgccgagcttgggtgtccccctcccggcgctgcgcacccagctcacg
gaaatggagttctggatgccgtcggcgcgcctgcacgcaggcgacgtggacgccttgtgc
cgccgccatctgctcaatgcccatgagcgccctgccctgccccagcgtgcgctgcacggc
atggtgatgggctttgcggacctggtgttcgaacatgaaggccgttattgggtactggac
tacaaatcgaacagcctgggcaagaccgacgccgactacgacactttcgcgctcgaatcg
gcaatggcacgccaccgctatgacgtgcaggctgcgctgtacctgctcgcgctgcaccgg
ctgctgcgcgcgcggctgggcacgacctacgacccgtctcgccaactcggcggcgccctc
tacctcttcctgcggggtattcgcggcccctgctgcggcgagtacgccattcctgctaca
ggcgaagtgatcgccttgctcgacacgctcgatcaacagctcaccgatgaggcggcactg
gcatga
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