Thauera aromatica: Tharo_2437
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Entry
Tharo_2437 CDS
T05381
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tak
Thauera aromatica
Pathway
tak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tharo_2437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tak03400
]
Tharo_2437
Enzymes [BR:
tak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Tharo_2437
DNA repair and recombination proteins [BR:
tak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tharo_2437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
Helicase_RecD
PhoH
AAA_22
UvrD-helicase
SLFN-g3_helicase
DEAD
AAA_5
nSTAND3
AAA_28
AAA_16
Mg_chelatase
NPHP3_N
ResIII
ATPase
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
AVR89334
UniProt:
A0A2R4BQ34
LinkDB
All DBs
Position
2597496..2599529
Genome browser
AA seq
677 aa
AA seq
DB search
MSSTTVCTPEAQDKRTQVLGTLRAMSDAGLLRHLDSAFAAFIATLDPGADPALLVATAML
SRMEGHGHSCLPMAGLPATDPTLFGWPTEAQASVAALWHDLPPKLEGWLGAATASPTAQR
IGRDPDRGQPLVIDGPDTAPRLYLRRYWQFERTVGRAIIARCRKTNPADEARTRAWLDRF
FARNDGGQTRKSPVDWQKIACAIALRSRLTIITGGPGTGKTYTAARLLAVLLATAAEPQR
LRVALAAPTGKAAARLKQSIDGSLQSLQASIGNELDLATLTQRIGAARTLHSLLGARPDT
RRFRHHAGNPLDADIVIVDEASMVHLEMMAALLEALPERACLILLGDKDQLASVEAGAVL
GDLCRDAQAGRYSAETARYLMTTTGEALPDAYLARTGPSPELAQQTVMLRESLRFDGPIG
ALALAVNDAKDPALPGTLLRDDATGSLFVSEGAAQADVIESAVGGRPGASASYLDYTRAL
NEGPTDGSVDAHDAWTKNVLQAFDRFRLLCAVREGDWGVSGLNRAIERKLESARQLKPQG
TWYKGRPVMVTRNDPTLGIFNGDIGIALPAAESPALLRVYFLDGERLRSVAVSRLAHVET
AFAMTVHKSQGSEFEHTMLVLSAQSGNVLTRELIYTGITRARKAFSLFAERPGLLEVGAG
SVTRRESGLLQVLEEAE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaacaaccgtttgcacgcccgaagcacaagacaagcgcacgcaggtgctcggt
accttgcgcgccatgagtgacgccggcctcttgcgacacctcgacagcgccttcgccgcc
ttcattgcgacgctcgaccccggggccgacccggccctgctggtcgcaacagcaatgctc
agccgcatggaagggcacggccatagttgcctgccgatggccggtctccccgctactgat
ccgactctattcggctggccgactgaagcacaggccagcgtcgcggccttgtggcatgac
ctgcctcccaagctcgaaggctggcttggcgccgcgactgcaagcccgaccgcacagcgc
atcggccgcgaccccgatcgaggccagccattagtcatcgacggtcccgacactgccccc
cgcctctacctgcgccgctactggcaattcgagcgcacagtaggtcgtgcgatcatcgca
cgctgcaggaaaaccaacccggctgatgaagcgcgcacgcgcgcctggctggatcgtttc
tttgcccgtaatgatggcggacagacccgaaaatcgcccgtcgactggcaaaagatcgcc
tgcgcaatcgccttgcgcagccggctcacgatcatcaccggcggccctggcaccggcaag
acctacacggccgcacgcctgcttgccgtgctgctggccaccgccgccgaaccacagcgc
ctgcgcgttgcgctggctgcgccaacgggtaaagcggcagcccggctcaagcaatcaatc
gatggctcactacagagcctgcaagccagcatcggcaatgaactcgatctggccacactc
acccagcgcatcggggcagcgcgtacgctgcactcactgctcggcgcacgaccggatacc
cggcgcttccggcaccacgccggcaatccgctcgacgccgatatcgtcatcgtcgatgaa
gcctcgatggtgcatctggagatgatggccgcgctccttgaggcgctgcccgagcgcgcg
tgcctcatcctgctcggtgacaaggatcagctcgcgtcggttgaagctggtgcggtactg
ggtgacttgtgccgtgatgcgcaggctggccgctacagtgcagagacggcacgctatctc
atgaccaccacgggagaggcgcttcccgacgcgtatctcgctcggacgggcccgtcacct
gagctcgcccagcagaccgtgatgctgcgtgagagcctgcgcttcgatggcccgatcggc
gcgctcgcgctcgcggtcaacgatgcaaaggatcctgcgctgccgggcacgctcctgcgt
gacgatgccacgggcagcctcttcgtctccgagggggcagcccaggcggacgtcatcgag
tcggccgtcggcggccgtccgggtgcgagcgcctcctatctcgactacacccgggctctg
aacgaaggcccgaccgacggcagcgtcgacgctcacgacgcatggacgaagaacgtcctt
caagccttcgatcgattccgcctcctgtgtgcagtccgcgagggcgattggggcgtgagt
gggttgaaccgggccatcgagcgcaaacttgagtccgcccgacaactgaagcctcaagga
acttggtacaagggccggccggtgatggtcacccgcaacgacccgaccctcggcatcttt
aacggcgacatcggcatcgcgctccctgcggcagaaagcccggcgctgctgcgcgtgtac
ttccttgacggcgagcgccttcgctcggtcgcggtcagccgactggcccacgttgagacg
gcgtttgcgatgactgttcacaagagccagggttcggagttcgagcacaccatgctcgta
ctctcggcccagagcggcaacgtgctaactcgcgagctgatttacaccggcatcacccgt
gctcgaaaagcattcagcctgtttgccgagcgacctgggctgctggaggtgggtgcaggc
agcgtcacccggcgcgagagcgggctgctgcaagtcctggaggaagccgaatga
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