Thauera aromatica: Tharo_2455
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Entry
Tharo_2455 CDS
T05381
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tak
Thauera aromatica
Pathway
tak03030
DNA replication
tak03430
Mismatch repair
tak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tharo_2455
03430 Mismatch repair
Tharo_2455
03440 Homologous recombination
Tharo_2455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tak03032
]
Tharo_2455
03400 DNA repair and recombination proteins [BR:
tak03400
]
Tharo_2455
Enzymes [BR:
tak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tharo_2455
DNA replication proteins [BR:
tak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tharo_2455
DNA repair and recombination proteins [BR:
tak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tharo_2455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AVR89352
UniProt:
A0A2R4BQ62
LinkDB
All DBs
Position
complement(2620901..2624449)
Genome browser
AA seq
1182 aa
AA seq
DB search
MNSAPAPAALQAEPSLVPSAPRFVHLRLHSEYSITDGIVQLDPAIASAAAEGMPALGISD
LANLFGMVKFYKGARAKGIKPIIGVDAWIQNEAERDKPFRVLLICRDRAGYGQLCALLTR
AYLDNKYRGRAEMRREWFDDGAASGLLCLSGALDGDIGAALAAGNGELAAQLAADWARRF
PDAFYIEIQRAGHPGTESYIRHAVDIAARLGLPVVATHPVQFLKREDFKAHEARVCIAQG
YVLADKRRPREFTEEQYLKSQAEMCELFADLPEALDNAVEIARRCSLTVQLGKNFLPLFP
TPEGMTLDDFLIAEAKAGLERRLAQLYPHPEEREKQRPRYEQRLKFETDTIIQMGFPGYF
LIVADFIRWGKNNGVPVGPGRGSGAGSLVAYSLDITDLDPLEYALLFERFLNPERVSMPD
FDIDFCQDNRYRVIEYVRERYGKDAVSQIATFGTMASKAVVRDVGRVLDLPYGLCDRLSK
LIPIEGAKPVSLAKAYELEPQIGDMMADGNDGESVRDLWSLAQPLEGLSRNVGMHAGGVL
IAPGKLTDFCPLYIADGEDATPVSQFDKDDVEAVGLVKFDFLGLRNLTIIELALEYVARL
EGSRPELMSLGFEDPAAYQILKDANTTAIFQVESDGMKKLLKKLAPDRFEDIIAVLALYR
PGPLGSGMVDDFILRKKGQQEIDYFHPDLKACLEPTYGVIVYQEQVMQISQIIGGYTLGG
ADMLRRAMGKKKPEEMAKHRATIAEGAKQKGYDPALAEQLFDLMTKFAEYGFNKSHTAAY
AVVTYHTAWLKAHHCAAFMAATMSSDLDNTDTVKIFYEDTVANKIAVLPPDVNASDYRFV
PVDRKTIRYGLGAVKGVGEPAVRAILAARQKGGEKGGEKGGEFRDLFDFCERTDRRLVNR
RVIEALIRAGAMDTLAGHQGLDRAQLMATVALAMEAAEQAAANALQGGLFDLIPEAAGAA
PEFAKVRPWTERERLKEEKLAIGFFLSGHPFNAFKAEVRRFVRRTLAQLEPSRDLTMLAG
VVMEVRTKMGARGKMAFVQLDDGSEPREVAVYSEVLDANRGKIVTDEVLVVEGKVSNDEF
SGGLRIVAERLLTLGEARGRFARALRLCLDGGAGSAAAAVGRLQGLLEPFRAEGCPVRLR
YRNAAAEAELLFGERWRVRLDDALLDALREDLAPEAVEVIYA
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgcccccgcccccgccgccctccaggccgagccgagcctggtgccgagcgct
ccacgcttcgtacacctccgcctgcattccgagtactcgatcaccgacggcatcgtccag
ctcgatccggccatcgccagcgctgcggctgagggcatgccggcgctcgggatctccgac
ctcgccaacctgttcggcatggtcaagttctacaagggggcgcgcgccaaggggatcaag
ccgatcatcggcgtcgacgcctggatccagaacgaggccgagcgcgacaagccttttcgt
gtgctgctgatctgccgcgaccgggccggttacggccagctctgcgcactgctgacacgt
gcctatctcgacaacaagtatcgcggccgcgccgagatgcgccgcgaatggttcgacgac
ggcgccgcgagcgggctgctgtgcctgtccggggcgctggacggcgatatcggcgcggca
ctggccgccggcaacggcgagctcgccgcccagctcgccgccgattgggcgcggcgcttt
cccgacgccttctacatcgagatccagcgcgccggccatcccggcaccgagagctacatc
cgccacgcggtggacatcgctgcccggctcggcctgccggtggtcgcgacccacccggtg
cagttcctcaagcgcgaggacttcaaggcccacgaagcgcgcgtctgcatcgcccagggc
tacgtgctcgccgacaagcgccggccgcgtgagttcaccgaggagcagtacctcaagagc
caggccgagatgtgcgaactcttcgccgacctccccgaggcgctcgacaacgcggtcgag
atcgcgcgccgctgctcgctgacggtgcaactgggcaagaacttcctgccgctgttcccg
acgcccgaaggcatgaccctggacgacttcctgatcgcggaagccaaggccggcctcgag
cggcgcctcgcccagctctacccgcaccccgaggaacgcgagaagcagcgtccgcgctac
gagcagcgcttgaagttcgagaccgacaccatcatccagatgggtttccccggctacttc
ctgatcgtggccgacttcatccgctggggcaaaaacaacggcgtgccggtggggccgggc
cgcggctcgggcgcgggctcgctcgtcgcctattcgctcgacatcaccgacctcgacccg
ctcgaatacgcgctgctgttcgagcgcttcctcaacccggagcgggtgtcgatgcccgac
ttcgacatcgacttctgccaggacaaccgctaccgcgtcatcgaatacgtgcgcgagcgc
tacggcaaggatgcggtgagccagatcgccactttcggtaccatggcctcgaaggcggtg
gtgcgcgacgtcggccgcgtgctcgacctgccctacggcctgtgcgaccgcctctcgaag
ctgattccgatcgagggcgccaagcccgtctcgctcgccaaggcctacgagctggagccg
cagatcggcgacatgatggccgacggcaacgacggcgaatcggtgcgcgacctgtggagc
ctcgcccagccgctggaagggctctcccgcaacgtcggcatgcacgccggcggcgtgctg
atcgcgcctggcaagctcaccgacttctgcccgctctacatcgccgacggcgaggatgcc
acgccggtgtcgcagttcgacaaggacgatgtcgaagccgtcggcctggtcaagttcgac
ttcctcggcctgcgcaacctcaccatcatcgaactcgcgctggagtacgtggcccgcctg
gagggcagccggcccgagctgatgagcctgggcttcgaggaccccgccgcctaccagatc
ctgaaggacgccaacaccacggcgatcttccaggtcgaatcggacggcatgaagaagctc
ttgaagaagctcgctcccgaccgcttcgaggacatcatcgcggtgctcgcgctctaccgc
ccggggccgctcggctcgggcatggtggacgacttcatcctgcgcaagaagggccagcag
gagatcgactacttccaccccgacctcaaagcctgcctggagccgacctacggcgtgatc
gtgtatcaggaacaggtgatgcagatcagccagatcatcggcggctacactctgggcggc
gccgacatgctgcgccgcgcgatgggcaagaagaagcccgaggagatggccaagcaccgc
gccaccatcgccgagggggcgaagcagaagggctacgacccggcgctcgccgaacagctc
ttcgacctcatgaccaagttcgcggagtacggcttcaacaagtcgcacaccgcggcctac
gcggtggtcacctaccacaccgcctggctcaaggcccaccactgtgcggccttcatggcg
gcgacgatgtcgtccgacctggacaacaccgacacggtcaagatcttctacgaggatacc
gtcgccaacaagatcgcggtgctgccgccggacgtcaatgcctccgactaccgcttcgtc
ccggtggaccgcaagaccatccgctacggcctgggcgcggtgaagggggtgggcgagccg
gcggtacgggcgatcctcgccgcacggcagaaagggggcgaaaagggcggcgaaaagggc
ggcgagttccgcgacctgttcgacttctgcgagcggacggaccggcgcctggtcaaccgc
cgcgtgatcgaggcgctgatccgcgccggggcgatggacacgctcgccggccaccagggg
ctggaccgtgcccagctgatggcgaccgtggcgctggcgatggaagcggccgagcaggcc
gcggccaacgcgctgcagggcgggctgttcgacctgattccggaggcggccggtgccgcg
cccgagttcgcgaaggtccggccgtggaccgagcgcgagcggctgaaggaagaaaagctc
gcgatcggcttctttctctccggccacccgttcaacgccttcaaggctgaggtgcgccgc
ttcgtgcgccgtaccctggcccagctcgagccttcgcgcgacctcacgatgctcgccggg
gtggtcatggaggtgcgcaccaagatgggggctcgcggcaagatggcgttcgtgcagctc
gacgacggcagcgagccgcgcgaagtcgcagtgtattccgaagtgctcgatgccaaccgc
ggcaagatcgtcaccgacgaagtgctggtggtcgagggcaaggtcagcaacgacgagttc
tccggcgggctgcgcatcgttgccgagcgcctgctgaccctgggcgaggcacgcggccgc
ttcgcccgcgcgctgcgcttgtgtctcgatggcggggccggcagtgccgccgccgcagtc
ggccgcctgcaaggcctgctcgagccgttccgcgccgagggctgcccggtccgtctccgt
taccgcaatgccgccgccgaagccgagctgctgttcggcgagcgctggcgggtacggctc
gacgacgcgctgctcgacgcgctgcgcgaagacctcgcgccggaggcggtcgaagtgatt
tacgcttag
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