Thauera aromatica: Tharo_2583
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Entry
Tharo_2583 CDS
T05381
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tak
Thauera aromatica
Pathway
tak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tharo_2583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tak03019
]
Tharo_2583
Enzymes [BR:
tak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Tharo_2583
Messenger RNA biogenesis [BR:
tak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Tharo_2583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AVR89478
UniProt:
A0A2R4BQ68
LinkDB
All DBs
Position
2771709..2773175
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AA seq
488 aa
AA seq
DB search
MSFADLGLIPELLQAVADAGYTEPTPIQRQAIPTVIAGHDVMGGAQTGTGKTAGFTLPLL
HRIARHASTSTSPARHQTRALILAPTRELAMQVYESVKTYSKHLPLRSVCVYGGVDIKPQ
QMELRRGIEVVIATPGRLLDHIEQKSINLSQVEVLVLDEADRMLDMGFIPDIKRILALLP
AQRQSLLFSATFSDEIKRLADQMLKDPQLIEVARRNMVSETITHVVHPVSSGMKRNLLAH
LLRHKPDTQALVFVDTKIVCGRLAHFLERSGISADAIHGDKSQQQRTETLEAFKSGKLRV
LVATDVAARGLDIDELPFVINFELPHTAEDYVHRIGRTGRAGHQGNAISLVSSEEKHWLA
EIQKLIKFEIPQEVVPGFDPEPEFFEAGSRSQRSRRPPAEHEAGERPRAARGGSRERESG
TRENTRATPRRNRSTIAADGFDFSKPYQPANPAVAVETTPGTIAPNPPEPLRRGQRPIAV
LLGGLGRK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgccgatctcggcctcattcccgaactactgcaagccgtcgccgacgccggc
tacaccgagccgacgccgatccagcgccaggccattcccaccgtcatcgccggccacgac
gtcatgggcggggcgcagaccggcaccggcaagaccgccggtttcaccctgccgctgctg
caccgcatcgcccgccacgccagcaccagcacctcgccggcgcgccaccagacgcgcgcg
ctgatcctcgcgcccacgcgcgagctggcgatgcaggtgtacgagtcggtcaagacctac
agcaagcacctgccgctgcgctcggtgtgcgtctatggcggggtcgacatcaagccccag
caaatggagttgcgccgcggcatcgaagtcgtgatcgccactccggggcgcctgctcgat
cacatcgaacagaagtcgatcaacctctcccaggtcgaagtgctggtgctcgacgaagcc
gaccgcatgctcgacatgggcttcattcccgacatcaagcgcatcctcgcgctgctgccg
gcccagcgccaaagcctgctgttctcggcgaccttctcggacgagatcaagcgcctcgcc
gaccagatgctgaaagacccgcagctgatcgaggtcgcgcgccgcaacatggtgtcggag
acgatcacccacgtcgtgcacccggtgtcctcgggcatgaagcgcaacctgctcgcccat
ctgctgcggcacaagcccgacacccaggcgctggtcttcgtcgataccaagatcgtctgc
ggacgcctggcccacttcctcgagcgcagcggcatctcggccgacgccatccacggcgac
aagagccagcagcaacgcaccgaaacgctggaggcgttcaaaagcggcaagctgcgcgtg
ctggtcgccaccgacgtcgccgcgcgcggcctcgacatcgacgagctgcccttcgtgatc
aacttcgagctgccgcacaccgccgaagactacgtacaccgcatcggccgcaccggccgc
gccggccaccagggcaatgcgatctcgctcgtcagctcggaggaaaagcactggctggcc
gaaatccagaagctgatcaagttcgagatcccgcaggaggtcgtgcccggcttcgacccg
gagcccgaattcttcgaggccggcagccgcagccagcgctcgcgccgcccgccggcagag
cacgaagccggcgaacgcccgcgtgccgcacgcggcggctcccgcgagcgggaaagcggc
acgcgcgagaacacccgcgccaccccgcgccgcaaccgttcgacgatcgccgccgacggc
ttcgacttcagcaaaccctaccagcccgccaaccccgccgttgccgtggaaaccacgccc
ggcacgattgcaccgaacccaccggagccgctgcgccgcggccagcgcccaatcgccgtc
ctgctcggcggcctcggacgcaagtaa
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