Thauera aromatica: Tharo_2730
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Entry
Tharo_2730 CDS
T05381
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tak
Thauera aromatica
Pathway
tak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tharo_2730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tak03021
]
Tharo_2730
03400 DNA repair and recombination proteins [BR:
tak03400
]
Tharo_2730
Enzymes [BR:
tak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tharo_2730
Transcription machinery [BR:
tak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tharo_2730
DNA repair and recombination proteins [BR:
tak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tharo_2730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Biotin_lipoyl_2
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
AVR89616
UniProt:
A0A2R4BQK1
LinkDB
All DBs
Position
complement(2917240..2921454)
Genome browser
AA seq
1404 aa
AA seq
DB search
MKSLLADLFKQTLPSEEEFDAITIGLASPDKIRSWSYGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLK
SLPSRLGMVLDMTLRDIERVLYFEAFVVVEPGMTPLNRGQLLTEDDYLAKVEEYGDEFDA
VMGAEGIGSLLRTLDVNLEVEKLRGDLETTNSEAKIKKYSKRLKVLEAFQQSGIKPEWMV
LQVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPDIIVRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVG
PTLKLHQCGLPKLMALELFKPFIFNKLELMGLATTIKQAKKMVETQEPVVWDILEEVIRE
HPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCVAFNADFDGDQMAVHVPLSLEAQM
EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYATREGVNVPGEGMIFTDVSEVKRAYE
SGQIALHARITVRLKEADLGPDGERIERIVRHNTTAGRAILSEILPAGLPFSVIDKPLKK
KEISKLINVSFRRCGLRASVIFADKLMQYGYGLATRAGLSIAVKDMLVPKAKEELIRAAE
SEVKEIAQQYTSGLVTDGERYNKVVDIWGRCGDQVAKAMMDQLGSEEVVDREGKTVRQES
FNAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITTNFREGLNVLQYFISTHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTRDGFAMKALIEGGEVVEPLRER
ILGRVCADDVVDPESQETVIEAGSLLDEDAVELIENLGVDEVKVRTPLTCETRYGLCAKC
YGRDLGRGSMVNVGEAVGVIAAQSIGEPGTQLTMRTFHVGGAASRAAAASGVEAKSGGTI
RFAGNMRYVANAKGEKVVIARSAELVVADDLGRERERHKLPYGATLLVDDGAAVKAGTQL
ASWDPHTRPIVTEYAGTVKFENVEEGVTVAKQIDEVTGLSTLVVIDAKRRSTTGSTKGVR
PQVKLLDERGEEVKIAGTEHSVALTFQVGSLITVKDGQQINVGDILARIPQESAKTRDIT
GGLPRVAELFEARAPKDAGMLAEYTGTVSFGKETKGKQRLVITEPDGTSHEFLIPKDKHL
MVHDGQVVNKGELIVDGPADPHDILRLQGISELARYIIDEVQDVYRLQGVKINDKHIEVI
VRQMLRRVVITDACDTRFIREEQVERSEVLDENDRIEAEGKLSAQYENVLLGITKASLST
DSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHRSRKAQEEGV
DLGPEHAWAPAENVVETQQDIEAS
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcctgcttgctgacctgttcaagcaaaccctccccagtgaggaagaattcgac
gcgatcaccatcggtctcgcgtcgccggacaagatccgctcgtggtcctacggcgaagtc
aagaagccggaaaccatcaactaccgtacgttcaagcccgaacgcgacggcctgttctgc
gccaagatcttcggtccggtgaaggactacgagtgcctgtgcggcaagtacaagcgcctc
aagcaccgcggcgtgatctgcgagaagtgcggcgtcgaagtgaccctgtcgaaggtgcgc
cgcgagcgcatgggccacatcgagctggccagcccggtcgcccacatctggttcctgaag
agcctgccgagccgcctcggcatggtgctcgacatgaccctgcgcgacatcgaacgcgtg
ctctacttcgaagccttcgtcgtcgtcgagcccggcatgactccgctcaaccgcggccag
ctgttgaccgaagacgattacctcgccaaggtcgaggaatacggtgacgaattcgacgcg
gtgatgggcgcagaaggcatcggctcgctgttgcgcacgctcgacgtcaatctcgaggtc
gagaagctgcgcggtgacctcgagaccaccaactccgaagccaagatcaaaaagtactcg
aagcgcctgaaggtgctcgaggccttccagcagtccggcatcaagcccgaatggatggtg
ctccaggtgctgccggtgctgccgcccgatctgcgcccgctggtgccgctcgacggcggc
cgcttcgcgacctcggatctgaacgacctctaccgtcgcgtcatcaaccgcaacaaccgc
ctcaagcgcctgctcgaactcaaggcgcctgacatcatcgtgcgcaacgaaaagcgcatg
ctgcaggaagcggtcgactcgctgctcgacaacggccgccgcggcaaggcgatgaccggc
gccaacaagcgcccgctgaagtcgctcgcggacatgatcaagggcaagggcggccgcttc
cgccagaacctgctcggcaagcgcgtcgattactcgggccgttcggtgatcgtcgtcggc
ccgacgctgaagctgcaccagtgcggcctgcccaagctgatggcgctcgaactgttcaag
cccttcatcttcaacaagctcgagctgatgggcctggcgacgaccatcaagcaggcgaag
aagatggtcgagacccaggaaccggtggtgtgggacatcctcgaggaagtcatccgcgaa
catccggtgatgctcaaccgcgcgcccacgctgcaccgcctcggcatccaggcgttcgag
ccggtgctgatcgaaggcaaggcgatccagctccacccgctggtctgcgtggcgttcaac
gccgacttcgacggcgaccagatggccgtccacgtgccgctctcgctcgaggcgcagatg
gaagcccgcaccctgatgctggcctccaacaacgtgctctcgccggccaacggcgaaccg
atcatcgtcccctcccaggacatcgtgctcggcctgtactacgccacccgcgagggcgtg
aacgtgccgggcgaagggatgatcttcaccgacgtctcggaagtgaagcgcgcctacgag
tcgggccagatcgccctgcatgcgcgcatcacggtgcgcctgaaagaagccgacctcggc
cccgacggtgagcgcatcgagcgtatcgtgcgccacaacacgaccgccggacgcgccatc
ctgtccgagatcctgccggccgggctgccgttcagcgtcatcgacaagccgctgaagaag
aaggaaatctcaaagctgatcaacgtctcgttccggcgttgcgggctgcgtgcgtcggtg
atcttcgccgacaagctgatgcagtacggctacggcctggcgacgcgcgccggtctgtcg
atcgcggtcaaggacatgctcgtgcccaaggccaaggaagagctgatccgcgccgccgag
agcgaggtcaaggagatcgcccagcagtacacctccggcctggtgaccgacggcgagcgc
tacaacaaggtggtcgatatctggggccgctgcggcgaccaggtggccaaggcgatgatg
gaccagctcggctcggaagaggtcgtcgaccgcgaaggcaagaccgtgcgccaggagtcg
ttcaacgccatctacatgatggccgactcgggcgcgcgcggttcggcggcccagatccgc
cagctcgccggcatgcgcggcctgatggcgaagccggacggctcgatcatcgagaccccg
atcacgaccaacttccgcgaaggcctcaacgttctgcagtacttcatctcgacccacggc
gcacgcaagggcctcgccgacaccgcgctgaagaccgcgaactcgggctacctgacccgc
cgcctggttgacgtcacccaggatctggtggtgatcgaggacgattgcggcacgcgcgac
ggcttcgcgatgaaggcgctgatcgaaggcggcgaagtggtcgagccgctgcgcgagcgc
atcctcggccgcgtctgcgccgatgacgtggtcgatcccgagtcccaggaaacggtgatc
gaggccggcagcctgctcgacgaagacgcggtcgaactgatcgagaacctcggcgtggac
gaggtcaaggtgcgcactccgctgacctgcgaaacccgctacggcttgtgcgcaaagtgc
tacggacgcgacctggggcgcggctcgatggtcaacgtcggcgaagcggtgggcgtcatc
gctgcgcagtcgatcggcgagccgggcacccagctgacgatgcggaccttccacgtcggc
ggcgcggcgtcgcgagcagcggcggcgagcggtgtcgaggcgaagtccggcggcaccatc
cgctttgccggcaacatgcgctacgtggccaacgccaagggcgaaaaggtcgtcatcgca
cgctcggccgagcttgtggtggccgatgatctgggacgcgagcgcgagcgccacaagctg
ccttacggcgcgaccctgctcgtcgatgacggcgctgcagtgaaggcgggcacccagctg
gcgtcgtgggatccgcacacgcgcccgatcgtgaccgaatacgccggtacggtgaagttc
gagaacgtcgaggagggggtcaccgtcgccaagcagatcgacgaagtgaccggcctgtcc
accctggtcgtgatcgacgccaagcggcgctcgaccaccggtagcaccaaaggcgtgcgc
ccgcaggtgaagctgctcgacgagcgtggcgaggaggtcaagatcgccggtaccgaacac
tcggtggcgctgaccttccaggtcggttcgctgatcacggtgaaggacggccagcagatc
aacgtcggcgacatcctcgcccgcatcccgcaggagtcggccaagacgcgcgacatcacc
ggcggcctgccgcgcgtcgcggaactgttcgaggcgcgcgcgccgaaggacgccgggatg
ctcgccgaatacaccggcacggtgtcgttcggcaaggagaccaagggcaagcagcgcctg
gtgatcaccgagccggacggcacttcgcacgagttcctgatcccgaaggacaagcacctg
atggttcacgacggccaggtggtgaacaagggcgaactcatcgtcgacggccccgccgat
ccgcacgacatcctgcgcctgcaggggatcagcgagctggcgcgctacatcatcgacgag
gtgcaggacgtctatcgcctgcagggcgtcaagatcaacgacaagcacatcgaggtgatt
gtccgccagatgctgcgccgcgtggtcatcaccgatgcctgcgatacccgcttcatccgc
gaagagcaggtggaacgctccgaagtgctggacgagaacgatcgcatcgaggccgagggc
aagctgtccgcccagtacgaaaacgtgctgctgggcatcaccaaggcttcgctgtcgacc
gactccttcatctcggcggcatcgttccaggaaaccacccgggtgctgaccgaggcggcg
atcatgggcaagcgcgacgaactgcgcggcctcaaggaaaacgtcatcgtcggccgcctg
attccggccggtaccggtctggcctaccaccgcagccgcaaggcgcaggaggaaggagtg
gacctcggtcccgagcatgcctgggcgccggccgaaaacgttgtcgaaacgcagcaggac
atcgaggccagttga
DBGET
integrated database retrieval system
