Thauera aromatica: Tharo_2969
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Entry
Tharo_2969 CDS
T05381
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
tak
Thauera aromatica
Pathway
tak02020
Two-component system
tak02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tak00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Tharo_2969
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tharo_2969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tak03021
]
Tharo_2969
Transcription machinery [BR:
tak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tharo_2969
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Sigma70_r4
HTH_5
HTH_Crp_2
MarR
CCDC162_N
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AVR89850
UniProt:
A0A2R4BRD7
LinkDB
All DBs
Position
3170060..3171478
Genome browser
AA seq
472 aa
AA seq
DB search
MKTSLQLKLSQHLTLTPQLQQSIKLLQLSTIELNQEIERFLLENPMLEREDDEGGDAPPP
PPGAERDAPPAEGEADARTHDGAEDEGIDWSNVGQGAGSRSEDDDSDYQDLQAADISLRE
HLDQQIALSPLSDRDRALARLIIEALDDDGYLHPPLEELLELLAPESGVTLDDLAIALHH
VQHLDPAGIAARTPQECLSLQLRALPEDGTRALALEIVDKHLALLAERNFARLKKLTGCD
DDGLRAAQALICSLDPHPGTRYGLHETRYVLPDVVVRKVRGHWTVRLNQEAMPRLRINRL
YASLLQQNRGQGGGLGAQLQEARWLIKNVQQRFDTILRVSQAIVDQQRQFFDHGDVAMRP
LTLREIADQLELHESTVSRVTTQKFMATPRGVFELKYFFGSHVATDTGGAASSTAIRALI
RQLVDAEDSKKPLSDARIAEVLGQQGIVVARRTIAKYRESLNIPPVSLRKSI
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccagcctccagctcaagctctcccaacacctcacgctgaccccacagctgcag
cagtcgatcaagctgttgcagctgtcgacgatcgagctgaaccaggaaatcgagcgcttc
ctgctcgagaacccgatgctcgaacgcgaggacgacgaaggcggagatgctcccccgccc
ccgcccggagccgagcgcgacgctccgcccgccgagggcgaggccgacgcacgcacgcac
gacggcgccgaggacgaaggcatcgactggtcgaacgtcggccagggcgccggcagccgc
agcgaagacgacgattccgactaccaggatctccaggccgccgatatctcgctgcgcgag
cacctcgaccagcagatcgccctgtccccgctgtcggaccgcgaccgggcactggcgcgg
ctgatcatcgaggctctggacgacgacggctacctgcacccgccgctggaagaactcctc
gaactgctcgcccccgagtccggcgtcacgctcgacgatctggcgatcgcgctgcatcac
gtccagcacctcgatccggccggcatcgccgcgcgcacgccgcaggaatgcttgtcgctg
cagctgcgcgccctgcccgaggacggcacccgggcactggcgctggagatcgtcgacaag
cacctcgcactgctcgccgaacgcaacttcgcccggctgaagaagctcaccggctgcgac
gacgacggcctgcgtgccgcccaggccctgatctgcagtctcgacccgcatccgggcaca
cgctacggcctgcacgagacccgctacgtgctgcccgacgtcgtcgtgcgcaaggtccgc
ggccactggacggtgcgcctcaaccaggaggccatgccgcgcctgcgcatcaaccgcctg
tacgccagcctgctgcagcagaaccgcggccagggcggcgggctgggcgcccagctgcag
gaggcgcgctggctgatcaagaacgtacagcagcgtttcgacaccatcctgcgcgtttcc
caggccatcgttgaccagcagcggcagttcttcgatcatggagacgtggcgatgcggcca
ctcactctccgggagatcgcggaccagctcgagctgcacgaatccaccgtatcgcgcgtc
accacgcagaaattcatggccacgccgcgcggcgtattcgaactcaagtatttcttcggc
agccacgtcgccaccgacaccggtggagcggcatcatcaacggcgattcgtgcgctgatt
cgccagctggtcgatgccgaagacagcaagaaaccgctatccgacgccaggattgcagaa
gttttaggccagcagggtatcgtggtcgcacggcggacgatcgccaagtaccgcgaatcg
ctgaacatcccgccggtcagtctgcgcaagtccatctga
DBGET
integrated database retrieval system
