Thauera aromatica: Tharo_3183
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Entry
Tharo_3183 CDS
T05381
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tak
Thauera aromatica
Pathway
tak03030
DNA replication
tak03410
Base excision repair
tak03420
Nucleotide excision repair
tak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tharo_3183
03410 Base excision repair
Tharo_3183
03420 Nucleotide excision repair
Tharo_3183
03440 Homologous recombination
Tharo_3183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tak03032
]
Tharo_3183
03400 DNA repair and recombination proteins [BR:
tak03400
]
Tharo_3183
Enzymes [BR:
tak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tharo_3183
DNA replication proteins [BR:
tak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Tharo_3183
DNA repair and recombination proteins [BR:
tak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Tharo_3183
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tharo_3183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AVR90064
UniProt:
A0A2R4BS89
LinkDB
All DBs
Position
complement(3426868..3429627)
Genome browser
AA seq
919 aa
AA seq
DB search
MSTLLLVDGSSYLYRAFHALPDLRNSRGEPTGAIRGVLSMLRRLESDYKAEFRACVFDAK
GKTFRDDWYPDYKSHRPPMPDDLRAQIEPLHEAVRAEGWPLLAVDGVEADDVIGTLTRQA
LERGWEVVISTGDKDLTQLVRPGVRWVNTMSEEVLDEAGVTAKFGVPPERIVDYLALVGD
TVDNVPGVEKCGPKTAVKWLTEYGSLDALVANAAKVGGKVGDNLRRHLDFLPLGRRLVTV
VTDLALPVTLDELPARDDDKAALRALYERFEFRGWLKDLDGAAAGVASVADAKAATEARR
FADEGTVADDPPCAPGAHRSGYVAILDWPTFDAWLAKIGAAGLTAFDTETTSLDPMAAKL
VGMSFAVAPGEAAYLPLAHRGQDLPAQLALAEVLVKLRPWLESDRHPKLGQNLKYDAHVL
ANHGITLRGITHDTLLESYVLESDKTHDLDSLARRHLGLTAIPYTEVCGKGAKQIGFDEV
TIERATEYAAEDADLTLRLHRKLWPQLEAAPRLAALYRDLELPVLEVLLEMERTGVLIDP
FLLAQHGEELGRRVHELEREAHALAGQPFNLGSPKQLGEILFVKLGLPVVKKTATGQPST
DEDVLTQLAEDYPLPKLLLEHRSLSKLKSTYADKLPRMVDPRTGRVHTSFSQATAVTGRL
SSSEPNLQNIPIRTPEGRRIRAAFIAPREHLIVSADYSQIELRIMAHLSGDARLLEAFAR
GEDVHRATAAEVFGCTPAEVTSEQRRYAKVINFGLIYGMSAHGLAKNLGIERAAAQGWID
RYFARYPGVADYMERIKAEAKAAGYVETVFGRRLYLPDIRAQQAGRRQAAERAAINAPMQ
GTAADLIKKAMIAVSRWLASSALKSKLVLQVHDELVLEVPRAELEAVRAELPRLMGEVAA
LQVPLLVEVGAGNNWDEAH
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtccactttgcttctcgtcgacggttccagctacctgtaccgcgccttccacgccctg
cccgacctgcgcaattcgcggggcgagccgacgggggcgatccggggcgtgctgtcgatg
ctacgtcgcctcgaaagcgactacaaggccgaattccgcgcctgcgtgttcgatgccaag
gggaagacctttcgtgacgactggtatcccgactacaagtcccaccgtccgccgatgccc
gacgacctgcgcgcccagatcgagccgctgcacgaggcggtgcgggccgaaggctggccg
ctgctggcggtcgatggggtcgaggccgacgacgtcatcggcaccctgacccgccaggcg
ctcgagcgcggctgggaagtggtgatctcgaccggcgacaaggacctcacccagctcgtg
cgcccgggcgtgcgctgggtcaacacgatgagcgaggaggtgctcgacgaagccggcgtc
accgccaagttcggcgtcccgcccgagcgcatcgtcgattatctggcgctggtcggcgac
accgtcgacaacgtgcccggcgtggagaagtgcggaccgaagacggcggtgaagtggctc
accgagtacggcagcctcgacgccctggtcgccaacgccgccaaggtcggcggcaaggtc
ggcgacaacctgcgccggcacctcgatttcctgcccctcgggcggcgcctggtgacggtg
gtgaccgacctcgccctgccggtgacgcttgacgagctgcccgcgcgcgacgacgacaag
gcggcgctgcgcgcgctgtacgaacgtttcgagttccgcggctggctgaaggatctcgat
ggcgccgcggcgggagtggcgagcgtcgccgacgccaaggcggcgaccgaggcgcgccgc
ttcgccgacgagggcacagtggcggacgacccgccgtgcgcccccggcgcccaccgcagc
ggctacgtcgcgatcctcgattggcccacgttcgacgcctggctggcgaagatcggcgcc
gccgggctcaccgccttcgacaccgagaccaccagcctcgacccgatggcggcaaagctg
gtcgggatgtcgttcgcggtcgccccgggcgaggccgcctacctgccgctggcgcatcgt
ggccaggacctgcccgcgcagctggcgctcgccgaagtgctggtcaagctcaggccctgg
ctggaatccgaccgccaccccaagctcggccagaacctgaagtacgacgcccacgtgctt
gccaaccacggcatcaccctgcgcggcatcacccacgacaccctgctcgaatcctacgtg
ctcgaaagcgacaagacgcacgacctggattcgctcgcccgccgccacctcggcctgacg
gccatcccctacaccgaggtctgcggcaagggcgccaaacagatcggcttcgacgaggtc
acgatcgagcgcgccaccgagtacgccgccgaggacgccgacctcaccctgcgcctgcac
cgcaagctgtggccccagctcgaggccgcgccgcggctggccgcgctgtatcgcgacctc
gagctgccggtactcgaagtgctgctcgagatggagcgcaccggggtgctgatcgacccc
ttcctgctcgcccagcacggcgaggagctcggccgccgcgtgcacgagctcgaacgcgag
gcccacgccctcgccggccagcccttcaacctcggctcgcccaagcagctcggcgaaatc
ctgttcgtcaagctcggcctgccggtggtgaaaaaaaccgccaccggccagccgtccacc
gacgaggacgtgctcacccaactcgccgaggactacccgctgccgaagctgctgctcgaa
caccgcagcttgtcgaaactcaagagcacctacgccgacaagctgccgcgcatggtcgat
ccgcgcaccggccgggtgcacaccagcttctcccaggccaccgccgtcaccgggcgcttg
tcgagctccgagcccaacctgcagaacattccgatccgcacgcccgaaggccgccgcatc
cgcgccgccttcatcgccccgcgcgagcacctcatcgtctccgccgactattcgcagatc
gaactgcgcatcatggcccacctgtcgggcgatgcccgcctgctcgaagccttcgcccgc
ggcgaggacgtgcaccgcgccaccgccgccgaggtcttcggctgcaccccggccgaagtc
acgagcgagcagcgccgctacgccaaggtgatcaacttcggcctcatctacggcatgagc
gcgcacggcctggcgaagaacctcggcatcgagcgcgccgccgcgcagggctggatcgac
cgctacttcgcccgctaccccggcgtggccgactacatggagcggatcaaggccgaggcc
aaggcggcgggctacgtcgagaccgtgttcggccgccgcctctacctgcccgacatccgc
gcccagcaggccggccgccgccaggccgccgagcgcgcggcgatcaacgcgccgatgcag
ggcaccgccgccgacctgatcaagaaggcgatgatcgcggtcagccgctggctggcaagc
tcggcgctgaagtcgaagctggtcctccaggtccatgacgaactggtgctggaagtgccg
cgcgccgagctggaggcggtccgtgccgagctgccgcggctgatgggggaggtcgcagcg
ctgcaggtgccgctgctggtggaggtcggtgcggggaacaactgggacgaggcgcactga
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