Thermocrinis albus: Thal_0950
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Entry
Thal_0950 CDS
T01179
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tal
Thermocrinis albus
Pathway
tal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thal_0950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tal03019
]
Thal_0950
03009 Ribosome biogenesis [BR:
tal03009
]
Thal_0950
Enzymes [BR:
tal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Thal_0950
Messenger RNA biogenesis [BR:
tal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Thal_0950
Ribosome biogenesis [BR:
tal03009
]
Prokaryotic type
rRNA helicases
Thal_0950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Utp25_C
Cas3-like_C_2
ResIII
CMS1
Glyoxalase_5
PRAI
UvrA_inter
Toprim
Helicase_C_2
P-loop_SecA
DUF4554
Motif
Other DBs
NCBI-ProteinID:
ADC89582
UniProt:
D3SLF2
LinkDB
All DBs
Position
complement(894490..895587)
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AA seq
365 aa
AA seq
DB search
MEFSFSQLSEPLRKSITEMGFQHPTPIQREAIPLALAGYDLLGQAATGTGKTAAFGIPIL
EKLGKEDLLGALILTPTRELALQVKDQLFQLARYKGLRVFAFYGGTSVAKDIQVLSTVPP
HVVVGTPGRIKDLIGRGYISLEKVRFFVLDEADLMLDMGFIEDIEYIVSHLPNRRQTFMF
SATLPRQVEELAKRYLREHYRVVKVYTPELRPKIEERLIRLSSSAQKLSELEKILREHLL
EKVIVFVKTKKDAKDLHEVLRRKGFNAVALHGDMTQRQRESALKLFRDGKVKIVVATDVA
SRGLDIKGVGLVINYHLPEDPEIYIHRIGRTGRIGSYGKAYSFVTPEDSRALWRIKRLKE
KLIAS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggagtttagtttttcacaactcagcgaaccacttagaaaatccattactgagatgggt
tttcaacatccaacacccattcagagggaagccatacccctcgccctggcagggtatgac
cttttaggacaggctgctacagggacaggtaaaaccgctgcctttggtattcccatactg
gagaagttgggaaaagaggacttactgggagctcttatcctcactcccacccgagaactg
gcccttcaggtaaaggatcagctcttccagttggcaagatacaaaggactacgtgttttt
gccttttacggtggtacctctgtagctaaggacatacaagttctctccactgtgccacct
catgtggtggtaggtacacccggtaggataaaggatctgataggcagaggatatatctct
cttgagaaagtccgtttcttcgtattggacgaagcagatctcatgctagacatgggtttt
atagaggacatagagtacatcgtgtctcatcttcctaaccgaagacaaaccttcatgttc
tcggccactctgccccgtcaggtggaagaattagcaaagagatacctcagggagcactac
cgggtggttaaagtgtatacccccgaactcagacctaagatagaggaaagactcataagg
ctcagttcatcggcgcagaagttatcggagttggaaaagatcctgcgcgagcaccttttg
gagaaggtgatagtgtttgtcaaaaccaagaaagatgccaaggatcttcatgaggtcctc
agaaggaagggcttcaacgctgtggccctccacggagacatgacccaaagacaaagggag
agcgccctgaaactgttcagagatggaaaggtcaagatagtggtggccaccgatgtggca
tcaagaggacttgacataaagggggttggtctcgtcatcaactatcaccttccggaagat
cctgagatatacatccacaggataggaagaacgggacgtataggtagttatggaaaggcc
tacagcttcgtcacccctgaggacagtagagctctttggagaataaaacgccttaaagag
aaacttatagcgtcataa
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