Thermocrinis albus: Thal_1509
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Entry
Thal_1509 CDS
T01179
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tal
Thermocrinis albus
Pathway
tal03410
Base excision repair
tal03430
Mismatch repair
tal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Thal_1509
03430 Mismatch repair
Thal_1509
03440 Homologous recombination
Thal_1509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tal03400
]
Thal_1509
DNA repair and recombination proteins [BR:
tal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Thal_1509
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Thal_1509
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Thal_1509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADC90138
UniProt:
D3SN08
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Position
complement(1408542..1410179)
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AA seq
545 aa
AA seq
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MKGLSGKEWNLLSERISPDPEMIRSYGYVVAQVMANRGVTAEALDLKLRKILPPHLIPNM
DIAVERIAKAIKKRENILIYGDYDVDGVTASVLLYRFLRYAGAKVQVVLPNRSSGYGLNI
DLVKKWDSWVDLLITVDNGTTALEELRGRSKDTIVLDHHNPHGELPPAILVNPKIDQNTP
KDLREISSVGLAFYLITCLQRELQLDYDTRDELPLVAIGTLGDFMNLNTLNRILVYNGIR
ALNYYLQKGVKLLGLRLLIEKAGIPLPITSRDISFLVVPRLNSPGRVANPYYSFRLLSEN
RESIVKQLVLQIENFHQARKKLTEIAVGLAEEQLQKQKDVSIPLLKLEGRFKGVGGIVAG
QLVSRIQKPVVVVSVNDNLSSASARSVEGIDIHSTLAPLAHLFVKWGGHSQAMGFTIHTH
LLDVLEENLRYMPLPDSELRLDIDMELPIRRCDESLVEALRRMEPFGEGFPFPTFLSEPL
TLQISEISSGRLVMYHPDTGTRLVSYDRHLIGKISQREWRGRVVYSPSLREKNIFTLVDL
EDFSS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtctatcaggaaaagagtggaacctcttaagtgagcgtatatctccggatccg
gagatgataagaagctacggttacgttgtggcacaagtaatggctaacagaggtgtgacc
gcagaagcccttgatctgaagctgaggaaaattcttccacctcatcttattcccaacatg
gatatagcggtagagcgtatagcgaaggccataaagaagagagagaacatactcatatac
ggggactacgatgtagacggtgtaacagccagcgttctcttgtacagatttttaaggtat
gcaggagcaaaagtacaggtagttctgcccaacagatcgtcagggtacggtcttaatata
gatctcgttaaaaagtgggatagctgggtggatctcctcataacggtagacaacggaacc
accgccttagaagaactaaggggaagaagcaaggacaccatagttttggatcatcacaac
ccacacggagagctccctcccgctattctggtgaacccgaagatagaccagaacacaccc
aaagatctcagggagatatcttccgttgggctcgccttttacctcatcacatgtcttcag
agagaactccagctcgattacgatacgcgtgatgagctaccactggtggccataggtacc
ctgggagactttatgaatctgaataccctcaaccgcatactggtctacaacggtataagg
gctttgaactactacctgcagaaaggtgtaaaactcttaggcctgcgattacttatagag
aaggcaggtatcccgttacccatcacgtccagagacatatcctttctggtggtaccgaga
cttaactctccgggcagagtagccaatccctactatagcttccgacttttgtcagaaaac
agagagagtatagtaaaacagttggtgcttcagatagagaatttccaccaagcgaggaaa
aagctcacagagatagctgtaggacttgcagaagaacaactgcagaagcagaaggatgta
agcataccccttctgaaactggaaggacgttttaagggtgtgggtggtatagtggcagga
cagctggtgtccagaatccagaaacctgtggtagtagtttccgttaacgacaatctttcg
tcagcttctgccagatcggtggaaggcatagacatacacagtacactggctcctttggct
cacttatttgttaaatggggtgggcatagtcaggccatgggttttaccatacacacccac
cttttggatgtactggaagagaacctaagatatatgcccctacctgactcagagctcaga
ctggacatagatatggaacttcctataagacgatgtgatgaaagtttggtggaggctcta
aggcgtatggaaccattcggggaaggtttccctttccctacattcctatccgaacccttg
accttacagatctcagaaatatcgtctggtagactcgttatgtaccatccggatacaggt
acaaggctggtaagttacgatcgccatcttataggcaagatatcacagagagaatggagg
ggtagagtagtttacagtccatctttgcgagagaaaaacatcttcactctcgtggacctg
gaagatttctcctcttaa
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