Tyto alba (Barn owl): 104355516
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Entry
104355516 CDS
T07816
Symbol
CIITA
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
tala
Tyto alba (Barn owl)
Pathway
tala05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104355516 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tala01001
]
104355516 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tala04054
]
104355516 (CIITA)
Enzymes [BR:
tala01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104355516 (CIITA)
Protein kinases [BR:
tala01001
]
Serine/threonine kinases: Other
TAF1 family
104355516 (CIITA)
Pattern recognition receptors [BR:
tala04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104355516 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_9
LRR_8
LRR_14
NB-ARC
nSTAND_NTPase5
NPHP3_N
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
104355516
NCBI-ProteinID:
XP_042654708
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MNPFKEILPRVRKILSTATTSDDHTLLNLMLKEDVISKEYHQALLHEKDXEDLARKISLT
FVEKWDLYFKTLVPPCLNLYGSKPQSMTDNEPTGSNYISDSKRQIMDSFMSENGYLDLLH
SDFDPLHLYTVLDPKSSGNEEGDFSADPGIDASNYDQLNNMDFLCTMENGENGDELYLCS
NTIEAYARIAELAEYVLKDQQEKQVEDTFAGNLILDDIAAENTEKYADIKMQKCHKRTLL
DSTESCSGASEPKYKKIESSAPLIPECLPVSMKGNQENTGFADPPQQILNFVLGNGTSDV
IIYPVLTSSTETLISPSFPVNFCGLEMLKEVRVPIFPSEEPFKRPKPVEAFCTSLMDYFQ
DVCKSVAMEREVTLDHLFIDGTLVQIQTETRTGKNSLKAMEKELVTCSLQGKEKAALKKS
QIFKIPGGKNLETKVIMVLGKAGMGKSILVQKICQDWSNGEFSQFEFVFWFDCKQISLPE
KPYSLKDLLLGFFVKPQEGINEIFEYILQNPAKVLLIFDGFEGLHDHENFPRCLASQPEK
DLCSIKELLSGLIQKKILSGCTLLLTARPKDKVCQYVSKVDKTIEIVGFSPQQRELYITK
YFEGLPYCDNALKLIKECEYLFSHCYSPVMCRFVCFLCEAVLEMGGKSLPSTLTTVFLKF
VQQKIPLQTDVTAMQDQESLATLARIAWYLGEKHQSAMKSDLLPSKEVKEFALKYRFFLP
FAFPRHSDSGEQEFGSTFSDFVIQNFLGALHLTLAEEIKDKSLTKYLSFPSKKKKPYNWL
DLVPRFLAGLLFLQDDPFFCSLSNKDVKQSTKKQKTLSKSIRRLQINELCPERLLEILHC
IYETQSDYLLQHVALRLKPDLSFLGVVLAPPDVHVLHSILKRSRKEFSLDLRNSSIDLQG
LKDLVGLKNVASFRASLSDTVRLWKSLEQTKDYELLRASTEKFVLDPFKAKTMKDISDLS
DLVEMQKKMISCVQDVSGCSSYEIPAIKNLRKLEFALGPVCGLQGFLKLVEILAAFPSLQ
HLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITDVGTEKLATALPSLSSLKT
LSLYNNSICDFGAENLAKVLPAMASLRVLDVQYNKITGVGAQQLTDSLRKCPHIKNLVMW
NPTIPYGVLEHLQQLDSRISV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctttaaggagatcctgcctagagtaaggaagattctttcaactgctacaact
tctgatgaccacacattgcttaacctcatgctgaaagaagatgtgatatccaaggagtac
catcaagccttgctccatgaaaaagacnnagaggaccttgcaaggaagatatctttgaca
tttgtggaaaagtgggacctgtacttcaaaactttggttcctccttgtttaaacctctat
ggcagtaagcctcaaagcatgacagataacgagccaacaggaagcaattacatttctgac
agcaagagacaaataatggattcatttatgtctgaaaatggctatcttgatttgctgcac
agtgattttgatccattgcatctgtatactgtccttgatcctaagtcatctggaaatgaa
gaaggtgacttctctgcagatcctggaattgatgccagcaactatgatcagctcaataat
atggatttcctttgtacgatggaaaatggtgaaaatggggatgaattgtatctctgttcc
aacacaatagaagcgtatgctagaatagctgaattagcagaatatgtgctcaaagatcag
caggagaagcaggtggaagacacttttgcagggaaccttattttggatgacatagctgca
gaaaacacagagaaatatgctgacataaagatgcagaaatgtcacaaacgaaccttgtta
gactccacagagagttgttctggtgcttcagaacccaaatacaagaaaattgaatcttca
gcacctttgattcctgagtgtctacctgtcagcatgaaaggaaaccaagagaatacaggc
tttgcagatcctcctcagcagatactcaactttgttcttggaaatggcacatctgatgtt
ataatatatccagtgctgacttcttccacggaaacattgatatccccaagctttccagtt
aatttctgtggtttagaaatgttgaaagaagtccgagttcccatatttccttctgaagaa
cctttcaaaagaccaaagccagtggaagctttctgtacatcacttatggattatttccaa
gatgtgtgcaaatctgtggccatggagcgtgaagtaactcttgatcacctgtttattgat
ggaacacttgttcaaatccaaactgaaaccaggactgggaagaatagcttaaaagcaatg
gaaaaggagctggtaacttgcagtctgcaagggaaggaaaaggcagctcttaaaaaaagc
caaatatttaaaatcccaggaggtaaaaacttagagactaaagtgatcatggtgttggga
aaagcaggaatgggcaaaagcattcttgttcaaaagatctgccaggattggtccaatgga
gagttttctcaatttgaatttgtattttggtttgactgcaaacaaataagtttgcctgag
aagccatacagcctgaaggatctgcttcttggattttttgtaaaacctcaagagggaatc
aacgagatctttgagtatatattgcaaaatccggctaaagtccttctgatttttgatggt
tttgaagggttgcatgatcatgagaattttcctcgttgcttggccagccagccagagaaa
gacttgtgcagtataaaggagctgctttcaggactcatccagaaaaagatactcagtggt
tgtactttattacttacagcaagaccaaaagacaaggtgtgccagtatgtgtccaaagtg
gataagactattgaaatagtaggattttcccctcagcagagagaattgtatataaccaaa
tacttcgaagggttaccctactgtgataatgcactgaaattaatcaaagagtgtgagtac
ttgttcagtcattgttacagccctgttatgtgtcgattcgtttgttttctctgtgaggca
gtacttgaaatgggaggcaaaagccttccttcaactcttactaccgtcttcctgaaattt
gttcagcaaaagatacctttgcaaacagatgttacagccatgcaagatcaagagagtctt
gctacactagcccgtatagcctggtatcttggagaaaagcaccaaagtgccatgaaaagc
gatcttcttccttctaaggaagttaaagagtttgctctgaaatacagatttttcctgcca
ttcgcattccccagacattcagatagtggcgaacaggagtttgggagcacattctctgat
tttgtcattcagaatttcttgggtgcacttcaccttacgttagcagaagagataaaggat
aaaagtctaacaaaatacctgtcttttccatccaagaagaaaaaaccttataactggtta
gatttagtgcctcgatttttggctggattgttgttccttcaggatgaccccttcttctgc
tccctttcaaataaggatgtgaaacagtcaaccaagaagcagaaaacactctcgaaatct
attagaaggctgcagataaatgagctctgtccggagaggttactcgagattttacattgt
atttatgaaacacaaagcgattatcttttgcagcatgtggccttaaggctcaagccagac
ctgtcttttctgggtgtagttcttgcgccacctgatgtccatgtactgcactctatttta
aaaaggtcaagaaaagagttttccttggatttgcgaaacagcagcattgacttgcaaggg
ctaaaagacttggttggcctaaagaatgtggcgtcattcagggcctctctcagtgataca
gtcaggctctggaaatctttagaacagacaaaagactacgaactactgagagcatcaaca
gagaaatttgttcttgatccctttaaggcaaagacaatgaaggacatcagtgacctttca
gatcttgtagagatgcagaagaagatgatcagttgtgtgcaagatgtatctggttgcagc
agctatgaaattcctgccatcaaaaacctcagaaaactagaatttgcgctgggtccagtg
tgtggccttcagggattcctaaaacttgtggaaattcttgcagcatttccatcacttcag
catttagaccttgatgctctgagtgaaaatggcataggagatgaaggagcaaagagtcta
tctgaagtctttccaaccctgacatcactggaaacattaaacttatcacagaataagata
acagatgtgggtacggagaaactagctacagctcttccttccttgtcttcattaaagaca
ctaagcttatacaataatagcatttgtgattttggagcagaaaatcttgcgaaagttctt
cctgcaatggcatctttaagagtactagatgttcagtataacaaaataactggtgttgga
gcacagcagctgactgacagcctacgaaaatgtccccatatcaagaacttagtgatgtgg
aatcccaccattccctatggagttctcgaacaccttcagcagctggactctaggatcagc
gtgtag
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integrated database retrieval system
